Erwinia rhapontici: LJN55_07910
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Entry
LJN55_07910 CDS
T08392
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
erp
Erwinia rhapontici
Pathway
erp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LJN55_07910 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_07910 (uvrC)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJN55_07910 (uvrC)
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Ortholog
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
HHH_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UDQ81750
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Position
1670295..1672127
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AA seq
610 aa
AA seq
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MNDQFDAKYFLKTVTSQPGVYRMYDAASTVIYVGKAKDLKKRLSSYFRGNLASRKTEALV
ALICQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPYIFLSADAHPRLASHRG
AKHAKGEYFGPFPNGYAVRETLSLLQKIFPVRQCENSVYRNRSRPCLQYQIGRCLGPCVK
GLVTEEEYARQIDYVRLFLSGKDDQVLNQLVARMEHASQEMRFEEAARLRDQIQAVRRVT
EKQFVSNQGDDLDVIGVAFDSGMACLHVLFIRQGKVLGSRSYFPKVPSGTELAEVVQTFV
GQFYLQGSQARTLPADILLDFQLPEKELLADSLTELAGRRIAIQSKPRGDRARYLKLART
NAATALVTRLAQHSTVHQRLAALADTLKLPAIRRMECFDISHTMGEQTVASCVVFDANGP
LRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLSQAKEVFA
ELDVTWDKHHPLLLGVAKGTDRKAGLETLFLEPEGEGFALPPDSPALHVIQHIRDDSHNH
AITGHRNKRAKVKNTSALETIEGIGPKRRQMLLKYMGGLQPLINASMEEIASIPGISHAL
AEKIFYALKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatcagtttgatgcaaagtatttcctgaaaaccgtcaccagccagcccggcgtt
taccggatgtatgatgctgcgagtacggttatctacgttggcaaagcgaaagatctcaaa
aaacggctctccagctattttcgcggaaacctcgccagtcgtaagacggaagcgctggtg
gcgctgatttgccagatagacgtgacggtgacccatacggaaaccgaagcgctgctgctg
gaacataactacatcaaactttaccagccgcgctacaacgtgctgctgcgtgacgataaa
tcctatccctacatctttctgagcgcggatgcccatccgcgcctggcaagccatcgcggt
gccaagcatgcgaaaggggaatacttcggtcctttccctaacggctatgcggtgcgagag
acgttatcgctgttgcaaaaaattttcccggtacgccagtgtgaaaatagcgtgtatcgc
aaccgttcacgtccgtgtctgcaataccagattggtcgttgccttgggccttgcgtgaag
gggctggtgacggaagaggagtatgcgcgccagatcgactatgtgcgcttgttcctttcg
ggtaaagacgatcaggtcctgaatcagctagttgcacgcatggaacatgccagccaggaa
atgcgctttgaagaggctgcccgtctgcgcgatcagatacaggcggtgcgccgcgtcacg
gaaaaacagtttgtctccaatcagggggacgatctggatgtcatcggtgttgcgttcgac
tctggaatggcctgcctgcacgtattgtttatccgtcagggtaaggtgctgggcagccgc
agttatttcccgaaagtgcccagtggcacagaactggctgaagttgtgcagacatttgtg
ggtcaattctatttgcagggtagccaggcacgcacgttacccgctgatattctgctggat
ttccagttaccggaaaaagagctgctggcggactcgctgacagagcttgcaggaagacgt
attgccatccagagcaaaccccggggcgaccgcgcccgttacctgaagcttgcccgcacc
aatgcggctaccgcgctggtgacgcgtctggcacagcattccaccgtacaccaacggctg
gcggctcttgccgacacccttaagttaccggctattcgtcgtatggaatgttttgatatc
agccacacaatgggtgagcagacggttgcctcctgtgtggtgtttgacgccaacgggcca
ctgcgcagtgaatatcgtcgctataacatcactggcattactcccggtgatgactatgcg
gccatgaaccaggtgctgcgtcgccgttatggcaaggccattgaagagagcaaaatccct
gacgtgatcctgatcgatggcggtaaaggccagctttcacaggcgaaagaggttttcgca
gaactggatgtgacctgggataaacatcaccccctgttactgggagtggcaaaaggtacc
gatcgtaaagctggattggaaacgctgttccttgaaccggaaggggaggggttcgcttta
ccgccagactctccggcgttacatgttatccagcatattcgtgatgactctcacaatcat
gcaataacagggcatcgcaataaacgggctaaagtgaagaacaccagtgcgctggaaacc
atcgaagggatcggtccaaaacggcgccagatgctgctgaagtacatgggaggcctgcaa
ccgttgatcaatgcctcgatggaagaaatcgccagtatccctggaatttcacatgcgctg
gctgaaaaaatcttctatgcgctgaaacactaa
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