Erwinia rhapontici: LJN55_08505
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Entry
LJN55_08505 CDS
T08392
Symbol
rcsA
Name
(GenBank) transcriptional regulator RcsA
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
erp
Erwinia rhapontici
Pathway
erp02020
Two-component system
erp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LJN55_08505 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJN55_08505 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_08505 (rcsA)
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
LJN55_08505 (rcsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UDQ81859
LinkDB
All DBs
Position
complement(1783340..1783975)
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AA seq
211 aa
AA seq
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MPTIIMDSCNYTRLGLTDYMAVKGVKKKNITSVNDIEQLQIKCQQLQPGVVFINEDCFIH
ESDASQRIRNIIMQHPDTLFFIFMAISNIHFEEYLYVRKNLIITSKSIKPSTLDSLLSTY
FQKKLNLSPRYSSGFDVHPLTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNI
KRKIKTHNKQVIYHVVRLTDNVTSGIYVNVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgattattatggattcatgtaactatacacggctaggtttaactgactatatg
gcagtgaaaggggttaaaaagaaaaatataacctcagttaacgatattgagcagttacaa
ataaagtgccagcagcttcaacccggcgttgtttttattaatgaagattgcttcattcat
gaatccgatgcaagccaacgaatcagaaacattattatgcagcatcctgatacgttgttt
ttcatttttatggccatctctaatatccattttgaggaatacctctacgttcgtaagaat
ctgattattacatcaaaatcgataaagccgtcgaccctggattcattacttagcacgtac
tttcaaaagaaacttaatctgtcacctcgctattcttcgggcttcgacgtacatccactg
acgctcagtcagacggagtcaaacatgctgaagatgtggatgtcaggtcacgacaccatt
cagatttcagataaaatgcaaataaaagcgaaaacggtgtcatcacacaaaggtaatatc
aaacgtaaaataaaaacgcataacaagcaggttatttatcatgtggttcgtttaactgat
aacgttaccagcggtatttatgtcaacgtaagataa
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