Erwinia rhapontici: LJN55_09545
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Entry
LJN55_09545 CDS
T08392
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
erp
Erwinia rhapontici
Pathway
erp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJN55_09545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_09545
Transporters [BR:
erp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LJN55_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UDQ82052
LinkDB
All DBs
Position
2022972..2024576
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AA seq
534 aa
AA seq
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MSKFRKEFSRVNPNLTQAITDVAISRRGMMKLLSAGAVMSTGLIGFPEFSFAAEAPVKGG
KLRAAVANASASDTLDPAKGSNSGDYCRQFMFYSGLTELDKELKAQPALAESITSSDGLN
WNVKLRTGVTFHDGKTLTATDVVYSLSRHKDPAVASTVITLASQMKEIKAVSPSEVQITL
EQPNFDLPSILATSSFLIVQDGTKDFSKGMGTGPFVLTSFQPGVRTVGTKNKNYYKPGLP
HLDEVELMGVTDPAARVNALMSGDLHIVSTLGANDVKRLRQNGKFNILESKSGMYSDLII
RTDRTPGSNPDFVLAMKYLQPREMIVKTVLQGFGDVGNDTPVPPWHPMFNKDLPQRPLDL
DKAKFHLKKANMVGAKIEIITTPNIEGAVEGGQLLQQIARSAGLNVAVRRVPYDGYWSAH
WMKDPIGYGSVNPRPTLDMLFSQFYFSSAPWNESGWKNAQFDQLVTAARGESDQGKRKQM
YGDMQKLVYDNCGTLIPAFISSMDGCSNKVKGVEAMPSGMMMGYRFHEYAWLTS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttcgcaaagaatttagccgtgttaacccgaatttgacccaggcgattacg
gatgtcgcaatatcccgacgcggcatgatgaagctgctgtcagcaggcgcggtgatgagc
accggtctgattggttttccggaattcagctttgccgctgaagccccggtgaagggcggt
aaactgcgtgcggctgtcgccaacgcctccgccagcgatacgcttgacccggcgaaaggc
agcaacagcggcgactactgccgtcagtttatgttttatagcggtctgaccgaactggat
aaagaactgaaagcgcagcctgcgctggcggaatccattaccagcagtgatggcctgaac
tggaacgtgaagctgcgtacgggtgtcaccttccatgacggtaaaacgctgactgccacc
gacgtggtttactccctcagccgccataaagatccggcggtggcatcaacggtgatcacc
ctcgccagccagatgaaagagattaaggccgtcagcccgtctgaagtgcagatcacgctt
gagcagccaaacttcgacctgccgtcgattctggcgaccagctccttcctgattgtgcag
gacggcaccaaagacttcagcaaaggaatggggaccgggccgtttgttctcacctcgttc
cagccgggtgtacgtaccgtcggcacaaaaaacaaaaactactacaaaccgggcctgcct
cacctcgacgaagtggagctgatgggagtgaccgatccggcagcacgtgtcaacgcactg
atgtcgggcgacctgcatatcgtctctacgctgggcgcaaatgatgtgaaacgcctgcgt
cagaacggtaagttcaacattctggaaagtaagtcaggtatgtacagtgacctgattatc
cgtactgaccgtaccccgggcagcaatcctgacttcgtgctggcaatgaagtatctgcaa
ccgcgtgaaatgattgtgaaaaccgtgctgcagggctttggcgatgtgggtaacgacacc
ccggttccgccctggcatccgatgttcaacaaggatctgccgcagcgtccgctggatctc
gacaaagccaaattccacctcaaaaaggccaatatggtcggtgcgaaaatcgagatcatc
actaccccgaatatcgaaggggcagtggaaggcggccagctgttacagcagatcgcgcgt
tcagccggactgaatgtggccgtacgccgtgtgccgtatgacggttactggtcagcccac
tggatgaaagatcctatcggttacggctcggtcaacccgcgcccaacgctggatatgctg
ttctcccagttctacttctcctccgccccgtggaacgagtctggctggaaaaatgcacag
ttcgaccagttggttaccgccgctcgtggcgaaagcgaccagggcaaacgcaagcagatg
tatggcgacatgcagaaactggtgtacgacaactgcggcacgctgatcccggccttcatc
agttcgatggacggctgtagcaacaaagtgaaaggggttgaagcgatgccgtcaggcatg
atgatgggctatcgcttccacgagtatgcctggctgacgtcgtaa
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