Ehrlichia ruminantium Welgevonden (France): ERWE_CDS_01570
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Entry
ERWE_CDS_01570 CDS
T00233
Name
(GenBank) Conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
erw
Ehrlichia ruminantium Welgevonden (France)
Pathway
erw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERWE_CDS_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erw03019
]
ERWE_CDS_01570
Messenger RNA biogenesis [BR:
erw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERWE_CDS_01570
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GFIT
Motif
Pfam:
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CAI26651
UniProt:
A0A0H3M7P6
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Position
complement(256228..257856)
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AA seq
542 aa
AA seq
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MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQN
KKDLLGIVLTHAHEDHIGGIQYLWHDLQCPIYATKFTASLLDSKLKECSLNANITQIDPS
QKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDWKLDNNPVISPLSNTKRLQEL
GNQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIGCV
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQANKLPKNQILLLCTGCQGEPL
AATAKLANNSHSLTKLENEDTIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHV
SGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQCNVEKAIIVHPGDVIDLVHG
KKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIESIVFDSLRYDIKNKPFIEVQIEYV
DY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagataatttattgttcataccattgggtggagttggacaaataggtatgaat
gttaatttataccactttaaaggcaagtgggttataattgactttggagcaggttttgct
gatgacaacatgccaggaatagacatgattgttgctgatattagtttcattaagcaaaac
aaaaaagatctactaggaatagtattaacacatgctcatgaagatcacataggaggtata
caatatttatggcatgacttacagtgcccaatatacgctactaagtttactgcttcactg
ttagactcaaaattgaaagaatgctcactaaacgctaatattacccaaatagatccttct
cagaagcttatattaggaccatttactcttgaattcataaacatgacgcattctatacca
gaaatgaatgcaatagcattacacaccgaaaaaggaacggtaatacatacaggagattgg
aaattagacaataatcctgtaatcagccctttatctaatacaaaaagactacaggaacta
ggaaatcaaggagtattagcacttgtatgtgattcaacgaacattttcaccaaaaaaaaa
tcaggctcagaaggtgatttagaagaaagtttatttaacatactcaaaacttgtaataac
agagttgctatatccctattcgcttctaatattgcaagaatcaacactataggatgtgta
gcaaagaaactaggcagaaaaatagcaatactgggtaaatcccttataaggataatacag
gcagcaaaagatagtggatatcttacagatatcccagaattcattgatattaaccaagca
aacaaattaccaaaaaatcaaatattgctcctatgtaccggatgccaaggtgaaccatta
gcagctactgctaaacttgcaaataattctcattctttaacaaaattagaaaatgaagat
actatcattttctcttctaaaatcattccaggtaatgaaaagcgcatatacaatatattt
aataaatttgttaatatgggagttaatgtcataacagaatttatggaacatgtacatgta
tccggtcacccatctagacctgaagtatgtacaatgtattctttagtaagacctaagcta
tctattcctgtacatggagaatatatacatatgcatgaacatgcaaaggttgctcaacaa
tgtaatgtagaaaaagcaattatagttcacccaggagatgtaatagacttagtacacggg
aaaaaagttaattctgtaaaatctggttattttggtgttgatggtaattttctacatcat
ccacaaagtaatgttattttcatgcgaaaaaagatgagagatgcaggaataataatagta
acactaatccttaatagaagaaaagaattgctaaagacaccaagaattttcgcaccagga
gttctagataactcaactagcaataatttcctaataaaaaaaattacatctaaaatcagt
tctcaactccatactaagaaagaaaataaaattaagcatcacatagagagcatagtgttt
gactcattaaggtatgatatcaaaaacaaaccatttattgaagtacaaatagaatatgta
gattactaa
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