Escherichia coli O104 H4 2009EL-2071 (EAEC): O3O_24350
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Entry
O3O_24350 CDS
T02256
Name
(GenBank) DNA-binding transcriptional activator GadW
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
eso
Escherichia coli O104:H4 2009EL-2071 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eso03000
]
O3O_24350
Transcription factors [BR:
eso03000
]
Prokaryotic type
Helix-turn-helix
AraC family
O3O_24350
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AFS88583
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Position
264208..264936
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AA seq
242 aa
AA seq
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MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcattcgtcgttcattcgatatttatcatgaacag
cataaaatatcgctgcataacgagagtatcgtgctgctggagaaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacgactggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagctaccacgcaatttagggttacatagcaaagaccgtcta
ttaattaaccagtccccccccatgccgctggtgacggcgatttttgatagcttcaatgaa
tccggggtaaattcaccgatactgagcaatatgctctacctttcctgtttatcgatgttt
tctcataagaaagaactgatccccttacttttcaatagcatcagcactgtttcaggaaaa
gttgaacgccttattagctttgatatcgccaaacgttggtatctgcgcgatatcgcggaa
agaatgtataccagcgagagtctcatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcttccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcagaaaaatgtggctatagcagtacgtcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
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