Etheostoma spectabile (orangethroat darter): 116672026
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Entry
116672026 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04144
Endocytosis
esp04520
Adherens junction
esp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116672026
09144 Cellular community - eukaryotes
04520 Adherens junction
116672026
04530 Tight junction
116672026
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116672026
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116672026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116672026
NCBI-ProteinID:
XP_032359463
LinkDB
All DBs
Position
22:21143610..21542230
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AA seq
1390 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIQVHSLIEQAAMRYKKAIAKDPSYWVQVHRLEHGDGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFTSDMSSASAFQPYQPN
SEIEVTPSALRSNMPLHVRRTSDPSLAGLPSGEVPGGPEAPSRKNPTRWSTTVGFQKHKH
KPNTSAGTGSLERKGRGGQAYRSLPRDASGWTTQFQREMTRSSLSANHPMVDRWLDRQEQ
EEEDEERRRQERRIERIEPIGRADSSLEYSPVLSLESLLKPVTVSNGGGPLGIHVVPLSS
QDVRTQGLLVNRLERGGKAEQERLFQENDCIVKINQGDIRNLRFEQAQNIFKKAMCGPVI
LFHVVPAAMKRQYELLSARSELSPPQSNRVHFGPDSQQSGNRSSLVAGLTPRAGPQPGLN
HDHQGPLAGSTPEPSRRYATLPHILVSRTSTSPSLQRRVSTNPSTSSYLKNKGRRFNIQL
KKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDQLLEVSGVDLNDKSQ
EEVVALLRATPMGGTVNLSVIRPEDSLLPREVQPEEDDMVLTADGTQEFLTFEIPLNDSG
SAGLGVSVKGNRSKESHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMSNQD
AMETLRTSMSVEGNKRGMIQLIVARHVSKNNEVAPCSPPVLEHPVTSLLDNQERRISNSL
YETIEGLQNNSPRLANMIGRTGNYHLSPTVNMPQDDIVMIEDDRPPLLPVHLSDQSSSSS
HDDMGFVGEYPVPWIHELPGQNECSLSPDADPDGSFLREGFGRQSMSEKRTKQYENANDL
EIIKTRKSKSMDLVADEINCSTTTNGGSSEVGPSLGLKKSSSLESLQTAVAEVSMNSQIN
VNRPRSRIARGRGCNESFRAAIDKSYEKPGVTTAEEENIMETLDEDTEGSSRSGRESMST
SGDLIVGPGLNGNLSKDDRQKDRDKVGGKEKKKPERDKEKEKDKDKNKAKKGVLKGLGEM
FRFGKHRKDERPGDRMERKDSSKCKAEDMQASEEETLRMRLEQERIQAKMRELREKQAKE
REYAEIKTLSATFSSDEEHTYAGIGSLDSSVDSSSMETHNHHYHLPQSPQSPHLPLSPQD
NGPPLEALYAQVNKPRNGRPAAPDSSQMAPSNHDRIQRLRNEFQQARHEDDVDDRRHTYS
FNQSWVSNGTETLSGRHSVTVETQVQKQQQEDRDGFQQAQRQYNSLPRQPRKTPSTVSQD
SWDKVYMPADGFQTSKENPGYSSSQGSRNGYLGTSNFNARVLLETQELLRQEQRRREQEA
NKARPPAAQDTPSGSTYDHSREHLQASGSSVVQAPPQSKGPYRQDVPPSPSQLAKLSRLR
GSEKGRLFYS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactgtgtgtttcgggaggacccgggtggtcgttccgtgcggcgatgggaat
atacaagtccacagccttatcgaacaagctgccatgaggtataagaaggcgatcgctaag
gaccccagctactgggtccaggtccacaggttggaacatggagatggaggtattttggac
ctggatgacatgctgtgcgatgtggtggatgacaaagataggctggtagcagtatatgaa
gagcaggatcctcacaatggaggcgacggtaccagtgccagctccaccggtacgcagagt
cccgaacccttcaccagtgacatgagttcagcatcggcctttcagccctatcagcccaac
agtgagatcgaggtcaccccgtccgctctgcgatccaacatgcccctccatgtccgtcgc
accagtgatccctccctggccggccttccttcgggcgaagtcccgggtggtccagaagca
ccgtccagaaagaacccaacccgctggtccacaactgttggctttcaaaagcacaagcac
aaaccaaacacaagcgctggcaccggcagcctggaacgaaagggtaggggaggccaggcc
tatcggagtcttccacgtgatgcaagtggctggaccactcagttccagagggaaatgact
cgatcatccctgagcgccaaccatccaatggtggaccgatggcttgacaggcaggaacag
gaggaggaagacgaagaacgaaggagacaagaaaggaggattgaaaggattgagccaata
gggagggccgattcctcattggaatattctcctgtgttgagtctagaatccctgctcaaa
ccagtaacggtgtccaatggaggagggcccctcgggatccacgttgtgcctctcagttcg
caggatgtcaggactcagggcttgctggtgaaccgactggagcgtgggggcaaagctgag
caggagcgtctcttccaggagaacgactgcattgtcaaaattaatcagggagacattcgt
aacctgcgcttcgaacaagcccaaaacattttcaagaaggcgatgtgtgggcccgtcatc
ctttttcacgtggtccccgcagccatgaagagacagtacgagctgctgtcggcccggagc
gagctcagcccgccccagtccaacagagtccattttggcccagactctcagcagtcgggg
aacaggtccagtttggtggcggggctgactcccagagctggaccacagccaggcctcaac
cacgaccaccaaggacccctggcaggaagcaccccagagccgagccgacggtatgccacg
ttaccccacatcttggtctccaggacctccacttccccctccctgcagcgcagggtgagc
acaaatccctccaccagctcctacctgaagaacaaaggacgcagattcaacatccagctg
aagaaaggtccagagggtcttgggttcagcatcacatccagagacgtccccattggtggc
agtgctccaatttatgtcaaaaacatccttcctcgtggggccgccatccaagatggccga
ttgaaagctggagaccagctgctggaggttagtggagtggacctgaatgataagagccag
gaagaggtggtggccctgctacgagccacgcccatgggcgggactgtgaacctttctgtg
attcgcccagaggactccctgctgcctcgtgaagtgcagccagaggaagatgacatggtg
ttaaccgcagacggaacacaagagttcctgacctttgagatccctctgaacgactcaggc
tcagcgggcctgggggttagcgtcaagggtaaccgctccaaggagagccacgctgacttg
ggcatctttgtcaaatccattattaatggaggtgctgctagcaaggatggccgtctacga
gtcaacgaccagctcattgcagtcaatggggagtcattgcatgggatgagcaaccaggac
gccatggaaaccctgcgcacgtccatgtcggtagagggcaacaagcgagggatgattcag
ctcatcgtggctcggcacgtgtccaaaaacaatgaggtagccccctgcagtcctccagtt
ttagagcatccagtgacctctctactggacaaccaggagcgccggatttccaactctcta
tacgaaacaattgaaggcttgcaaaacaactccccacggctggctaatatgatcggacgc
actggtaactaccatctctctcccactgtgaacatgccgcaggacgacatagtgatgatc
gaagatgataggccacccctgctacccgtccacctttccgaccaatcatcctctagttcc
cacgatgacatgggcttcgtgggagaatacccggtgccctggatccacgagctgcccggt
cagaatgaatgctcgctcagcccagacgccgaccctgacggttcgttcctgagggagggc
ttcggccgccagagcatgtcagaaaaacgcaccaaacaatatgaaaatgctaatgatctg
gaaatcatcaagacgcggaagtccaagagcatggatctggtagcagatgagattaactgc
agcacaacaaccaatggaggttcgtcagaggttggaccctcgctgggactgaaaaagtcc
agctcccttgaaagcctccagacggctgttgccgaggtgtcgatgaacagtcagatcaat
gttaacaggccgcgctcgcggatcgctaggggccgcggctgcaacgagagcttccgagct
gcaattgacaaatcatacgagaaacctggtgtcacaacagcagaagaggagaacatcatg
gagacattggacgaggacacggagggaagttccagatcaggtcgcgagtcgatgtccacc
agcggcgacctcattgtgggacccgggctgaacggcaacctctccaaagatgacaggcag
aaagatcgggacaaggttggggggaaggaaaagaagaaacctgaaagggataaagagaag
gagaaagacaaggacaagaacaaagccaagaaaggcgtgctgaagggcctgggcgagatg
ttcaggtttggaaagcaccggaaggatgagcggccaggagacaggatggagagaaaggac
tccagtaaatgtaaagctgaggacatgcaggcgtcagaggaggagaccttgcggatgagg
ctggaacaagagagaatacaggccaagatgcgggagcttcgggaaaagcaggctaaggag
agggaatatgctgagatcaagacattgtcggcgaccttcagctcagatgaggagcacacc
tacgccggcatcggatcattagactcgtcggtggacagcagcagcatggagactcacaac
caccactaccatctcccccagagtccccagagccctcaccttcccttgagcccacaggac
aacggcccacccctggaggctctgtatgcccaggtcaacaaacctcgcaatggacgccct
gcagctccagacagcagtcagatggctcccagtaaccacgaccggatacaaaggctgagg
aatgagttccagcaggccaggcatgaggatgacgtcgatgaccgtaggcacacctacagc
ttcaaccagtcctgggtcagcaacgggacggagacgctgagcggacgccattcggtaaca
gtcgagactcaggtccagaaacagcagcaggaggatcgagatggtttccaacaagcgcag
agacagtacaactccctgccacggcaacctcgtaagactcccagcacggtgtcccaggac
tcatgggacaaggtgtacatgccagcagatggattccagacatcaaaggagaaccctggc
tactccagcagccagggatcgcgtaacggctaccttggaacgtccaacttcaatgcccgt
gtcctcttagagactcaggagttgctgaggcaggagcagagacgcagagagcaggaggcc
aacaaggccaggccacccgccgcacaggacacccccagcggcagcacctacgaccacagc
agagagcacctgcaggcctcgggctcttccgtggttcaggccccacctcagtccaagggc
ccctacagacaagatgtacccccgtcgccctctcagctcgcaaagctcagcaggcttcgg
ggctcagagaaagggagactgttttactcctga
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