Etheostoma spectabile (orangethroat darter): 116695007
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Entry
116695007 CDS
T08457
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116695007 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116695007 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116695007 (usp1)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116695007 (usp1)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116695007 (usp1)
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116695007 (usp1)
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116695007 (usp1)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
116695007 (usp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116695007
NCBI-ProteinID:
XP_032380922
LinkDB
All DBs
Position
9:12396339..12408715
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AA seq
876 aa
AA seq
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MFCCCVSVFHWQCSHQPPSVGLPTGKSANCCFCTVRIVKQVNGSKTGYFVKYIKLQSGLT
HSGTGKRMPGLQGENVVAALGSPIKRSKLSLKFLQKKETKRALDFSEPQADEPKIVEQEE
PEASSCDQVVPGPSPCPASPGLLLPSEKRETLVPFVGLNNLGNTCYLNSILQVLYYCPGL
REGVKKLYNLSKRKDKPKDETDKSEEQSGAVAEDLSAQIELLGSFNGLIASVEQLQSSFL
LNPDSFSDGELATPPRKILHTLRQLNPMYEGYLQHDAQEVLQCILGNIQEACVTIRKELE
LDREDADEPEVKLEPGVRLGSSSPATEEDGQVSGKRKSDTEVGNAKKKPKSVKSKTCDEE
VNRPLTRSKRKSSSDIMMDGTRDKDKEEVENEGMKTLNREEDKGSDNEGKGEKASKESDG
KRKKRSKLSWLRPSGKQPSIFSKFLSVGKISSTSVKNQNKPEQENGLAGDQSPNEKTSVE
SSPQDMAEDKKAVKLQEGLDLMEHLFQGRLVLRTRCLECESFTERREDFQDISVPVLDDE
PSIPDDLSEVSPDPKPELKTLKWAIGQFASVERIVGEDKYFCETCHHYTEAERSLLFDKT
PEVITIHLKRFSANSLDLDPYAGLSKVNTPLQTPLTLSLEEWCTRPLSTKGQRYQLFAVV
MHSGVTISSGHYTAFVHLSDLKDVKLLLRDKEETEEEEKESKEDTRVKDEALDYDDGEVS
FSLNARGQRGTSLASSKTRGKMLSEGGVGLLGGQRSLSSCDLGSSKHTEKAASSGSAEGS
KRRKPINGMGQKTEAGLNKEARVGEEELTPSLGSVETTEKQAFNNLLEYEGKWLLFDDSE
VRLFEEEDFLQACSPETSSSSTPYLLFYRRMPEHGR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttgttgtgtgtcggtgtttcactggcaatgtagccaccagccaccatcagtg
ggtcttccaacaggaaaaagcgccaactgctgtttctgtaccgtccgaatcgtcaaacaa
gtaaatggctcaaaaaccggatatttcgtgaaatacattaaacttcaaagtggattaact
cattcgggtaccggaaaaaggatgccaggtctgcagggggaaaatgttgtggcggcgctc
gggagccccatcaagaggagtaaactgtctctgaagttcctccagaagaaagaaactaaa
cgggctctggatttctctgaacctcaagcagatgaacccaaaatagttgaacaagaggag
cccgaggcaagcagctgcgatcaggtggtccctggtccttctccatgtccagcctcacct
ggcctcctcctgccatctgagaagagagagaccttggtgccatttgtggggcttaacaac
ttgggcaacacctgctatttgaacagcatcttacaggtgctgtactactgccccgggctc
agagaaggtgtaaagaaactgtacaacctgtctaaaagaaaagacaaaccaaaggatgaa
actgataaaagcgaagagcagtcaggagctgtggctgaagatttgtctgctcagattgag
ctccttgggagcttcaacggtctgatagcatcagtggagcagctgcagtccagctttctg
ttaaaccccgacagcttcagtgatggagaactcgccactccgcctcgaaaaatactccac
acactcaggcagctgaaccccatgtatgagggctatcttcagcacgatgcccaggaggtg
ctgcagtgcatcctgggaaatatccaggaggcttgtgtcaccatcagaaaggagttggag
ctggatagggaggatgccgatgagcctgaggttaaacttgagcctggtgtccgtttgggt
tcaagcagccctgcgacagaagaggacggccaagtcagtggaaagaggaagagtgacact
gaagtgggaaatgctaaaaagaagccaaaatctgtcaagtctaagacatgtgatgaagag
gttaatagacccctcactcgctccaaaaggaagtcctccagtgacatcatgatggacggc
acccgagacaaagataaagaggaggtggagaatgaagggatgaagacactgaatagggag
gaggacaaagggagtgacaatgaagggaaaggtgaaaaggcatctaaagagtctgatggg
aaaagaaagaagagatctaagctgagctggctgaggccttctgggaaacagccgagtatt
ttctccaagttcctcagtgtggggaagatcagctccacgagtgtgaagaaccaaaacaaa
ccagagcaggagaatggactggccggagaccaaagtcccaatgagaagaccagcgtggag
agttcaccccaagacatggctgaagacaagaaggcagtcaaacttcaagagggcctggac
ctgatggagcacttgttccagggccgactggttcttaggactcgctgtctggagtgtgag
agcttcacagagaggagagaagacttccaggacatcagcgtcccggtgctcgacgatgaa
cccagcatcccagacgacctttctgaggtctctcctgatcccaaaccagagctgaagacg
ttgaaatgggccatcgggcagtttgcttcagtggagcgcatcgttggggaggacaaatac
ttctgcgagacgtgtcatcattacacagaggcagagagaagtctgctgtttgacaaaact
cccgaagtgatcaccattcacctgaagcgcttctccgccaacagtttggacttggaccca
tatgcaggtctgtctaaagtgaacactcccttgcaaaccccgttgaccttgtctctggag
gagtggtgcacccggcccttgtccacgaaaggtcaacgctatcagctgtttgccgtggtc
atgcatagtggtgtcaccatcagcagcggccactatacggccttcgtccacctgtctgat
ctgaaagatgtgaagctcttgctgcgggacaaagaagaaaccgaggaagaggagaaggag
agtaaagaggacacccgggtgaaagacgaagcactggactatgatgacggagaggtgtct
ttcagcctgaatgcacggggtcagaggggtacgagtttggctagcagcaaaacacgagga
aagatgctgtcagagggcggggttggactcctggggggccagaggagtctgtctagttgt
gatctcgggagcagcaaacacacggaaaaagcagccagcagtggatcagcagagggatcc
aaacggaggaaacccatcaacggcatgggccaaaaaactgaagcaggactaaacaaggag
gctagagtaggagaggaggaattaacaccttcccttggcagcgtggagaccacagagaag
caggcctttaacaacctcctcgaatacgagggcaaatggctgctgtttgatgactctgag
gtgcgtttgtttgaggaggaggatttcctgcaagcctgctctcctgagacgtcgtcctca
tcgacaccgtacctgctgttctacagaaggatgcctgaacacggacgctaa
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