Etheostoma spectabile (orangethroat darter): 116702952
Help
Entry
116702952 CDS
T08457
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esp03016
]
116702952 (tsen54)
Transfer RNA biogenesis [BR:
esp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116702952 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
OCIA
Motif
Other DBs
NCBI-GeneID:
116702952
NCBI-ProteinID:
XP_032393401
LinkDB
All DBs
Position
15:complement(19996898..20005974)
Genome browser
AA seq
512 aa
AA seq
DB search
MADVNKTELQFYSEILSPSELFAARSRSHKIPVRGPKDFFPDDSDEQRQRLEQSLSEHWS
LISEERVEKLGNLVKATWIPSEQIVELQSPAGKFWQTMGFSAKGKQFLLPEEALYLMECG
NVQVFYRDLPLSIQDGYEKFLSSSTVSLQQYQVFGHLKRLGYVVHRFDPSSEPSSYARQL
NLPQCRDRAGRQLKRKRSASPASSNAEAQEESTADRREEAKRGYEGEEEEKLPESHLTMS
PETSSTQTATASSAHKGGGRTWWMTDVLRDQSDQRPASRTSRWDFSSIAFPDLGSTRCLS
SCLASPDPSLLPGSLTVGVCDIAPWTRKINLRKVKMSSREQKREKDKQRRQWDVNKNREV
QRCRHWAEYKEVLARRQGKRKGRPEHLWDREVTPLHDPTQPIPTAELLDKISVIKSTHLL
EGASRLKGSDDWRICFNVYQPDSAADFKKSNPGKPYSRMCVCSFDGPVPDLRAIKLLSFQ
SGDIPVVFAVVDYGDISFYTFKDFQLPTDVYP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtaaacaagaccgagttacagttctatagtgaaatattaagtccatctgaa
ctgtttgcagcccggtccaggagtcacaagatccctgtcagaggaccgaaggacttcttt
cccgatgactcagacgagcaaagacagcggcttgagcagagtctgagtgagcactggagc
ctcatatccgaggagagagtggagaagctagggaacctagtaaaggccacatggattcca
agtgagcagattgtggagcttcagtctccagctgggaagttttggcagacgatgggattt
tctgccaaaggcaagcagttcctcctccccgaagaagctctctacctgatggagtgtgga
aacgtgcaggtgttttaccgggacctgccgctgtccatccaggacggctacgagaagttt
ctgtcctcgagcacagtgagcctccagcagtatcaggtgttcgggcatttgaagaggctt
ggatatgtggtgcacaggttcgacccaagttcagagccatcgtcctacgcgaggcaacta
aacctgcctcagtgtcgtgaccgagcaggaagacagctgaagaggaagcgcagcgccagc
cctgcatccagtaacgctgaagcacaagaagaatccacagctgacagacgggaggaggct
aaacgcggctacgaaggtgaggaggaggaaaaacttcctgagtcacacctgacgatgtct
ccagagacttcaagcacccagacggccactgctagttcagcacacaaaggcgggggcagg
acctggtggatgacggatgttctcagggaccaatcagatcagcggcctgcctctaggacc
tcacgctgggacttcagctccatcgctttcccagacctgggatccacgaggtgcctctcc
agctgccttgcctccccagacccctctctgctccctgggtctttgactgtgggagtctgt
gacattgccccctggacccgaaaaataaacctgaggaaggtgaagatgtcctcaagggag
cagaagagggaaaaagacaagcagaggcggcagtgggacgtcaacaaaaacagagaggtt
cagcggtgcagacactgggcagagtacaaggaggtcctggcgaggcgccaggggaagcgt
aaaggccgaccagaacacctgtgggacagggaagtcactccgttacatgacccaacacaa
ccaatccccactgcggagctgctcgataaaatcagtgtgattaaatccacgcatctgctt
gagggggcatccaggttaaaaggctcagatgactggaggatttgtttcaatgtttaccaa
cccgattcagcggcggacttcaagaagagcaacccggggaaaccttactcccggatgtgt
gtgtgcagtttcgatggccctgtcccggacctgcgagccatcaagctgctgagcttccag
agtggagacatcccagtggtctttgctgtcgtggactacggagacatctccttctacacc
ttcaaagacttccagctgcccactgatgtgtacccctga
DBGET
integrated database retrieval system
