Etheostoma spectabile (orangethroat darter): 116704492
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Entry
116704492 CDS
T08457
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116704492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
116704492
NCBI-ProteinID:
XP_032395915
LinkDB
All DBs
Position
16:complement(14753291..14776796)
Genome browser
AA seq
2476 aa
AA seq
DB search
MHRFFVKLTFLIPAIVISQGLKCSLPTESCLNGGRCEATSNGNGECKCPSDYVGNRCQYP
SPCSPSPCRNGGECRAISHGNTFDFRCVCRLGFIDRLCLTPTNHACMSSPCRNGGTCDLI
TLNAFRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPSSFHGQTCKQDVN
ECAQTPSLCLNGGVCVNEVGSYNCRCPHEYTGQHCETPYMPCSPSPCQNGGTCVQKGDTF
YDCSCLPGFTGQHCEHNIDDCPGHSCQNGGMCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDNCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCNNDATCLDQIGGFHCICMP
GYEGVFCHINTDECASQPCLNNGKCIDKINSFHCECSKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEAGYTGSMCNINIDECAINPCQNGGTCIDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCEILLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICQNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDSIDTFTCTCLPGFRGSRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGSCLDSYGTYKCTCPNGYTGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAQQQGVEVVHLCRNSGQCLDAGSTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGASCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSSDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
SCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQITPDVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNRSSAFLRDLSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSTDGWPEWASMPVNVLGQVKESVSAMVSPRKRRELDPVQIKGSVVY
LEIDNRQCYQQSSECFQSATDVAAFLGALATSGNLNVPYIEAVTSVRPTPTISEFYPMYI
VFLGLAALGFICLGVLVSRKRRREHGQLWLPEGFKTSEPSKKKRREPLGEDSVGLRPMKN
SDINLMDDNQNEWDDEDPDCRRFRLEEQAMLDLSDHTDHRKWTQQHLDAADLRIASIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGTSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPIFLAAREGSFETAKVLLEHFANRDITDHLDQLPRDI
AQERMHYDIVRLLDEYNLVRSPGLHSDPLSTSSLSPPLCSPNDYLSNLKPTLSVKKVRKL
SAGGKGGKDGGKDNRMKKKKSLDGKGNLLDTSAVLSPVESLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDHMGQMSMGKDMGCMSFDPHPLRLSHMPVSSPSSQGPTSIGSNRG
GQCDWISRMHPGVGQQGGFTQAPPISHNMMGALHGVSTATLSQIMGYQNLQTSHLGSAHM
MQQAHSRQLQHQNSNSTTAGQSLNQSFPNIELNGSDMQQNNSHSMPIHTVMPQETQILGN
QFLTPPSQHSYSSPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSP
PTSIHSQMNLIPDQFK
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttctttgtgaaactaacatttctcattcctgcaatcgtcatctcacaaggt
ctaaaatgctccctgcccactgaatcatgcctgaatggaggaagatgtgaagccacctct
aatggaaatggagaatgcaagtgtcccagtgactacgtaggaaatcgttgccagtatcca
agcccctgcagcccttcaccctgccgcaatggtggtgaatgccgcgctatttcccatggc
aacacgtttgatttccgctgcgtgtgccgcctgggtttcatagaccggctatgcctgacc
cccaccaaccatgcctgcatgagctccccctgtcgcaatggtggaacttgtgatctcatt
accctcaacgccttccgctgccgctgcccacctgggtggtcaggtaaaacctgccagctt
gccaacccatgtgcgtccaatccatgcgcaaacggtggtcagtgctcagccttcgattcc
acgtacatttgcacctgcccctcctccttccacggtcaaacttgcaagcaagacgtcaac
gagtgcgcccagactccctctctctgtcttaatggtggtgtgtgtgtgaacgaggtgggc
tcatacaactgccgctgtcctcatgagtacactggtcaacactgtgagacaccctacatg
ccatgcagcccttcaccatgccagaatggaggcacctgtgtgcagaagggagacaccttc
tatgattgtagctgccttccaggctttacaggtcagcactgtgagcataacattgatgac
tgtccaggtcacagctgccagaatggtggtatgtgtgtggatggtgtgaacacctacaac
tgccagtgcccacctcattacacaggtcaatactgcacagaaaatgtggacgagtgtgag
ttgatgcccaacgcatgccagaatggaggaacatgccacgacactcacggcagctaccac
tgcgtctgcgtcaacggatggaccggtgacaactgcagcgagaacattgatgactgtgcc
agcgcggcttgttaccacggcgctacctgccacgaccgcgtagcctccttcttctgcgag
tgtcctcatggacgcacaggtttgctgtgccaccttgatgacgcctgcatcagcaatccg
tgtcaaaaaggttccaactgtgataccaacccagtcaacggcatggcaatctgcacctgt
ccccccggttatactgggtcagcctgcaacctggacattgacgaatgctccctcggtgcc
aacccttgtgaacacggtgggcgctgcctcaacaccaaaggctctttccagtgcaagtgt
cttcaaggatatgaaggacctcgttgtgagatggatgtcaatgaatgcatgtctaatcct
tgcaacaatgatgccacctgcctggatcagattggagggtttcactgcatttgtatgcca
ggatatgagggtgtgttctgccacatcaacacagatgagtgtgccagccaaccttgtctc
aacaatggcaagtgcattgacaaaatcaactccttccactgcgagtgctccaaaggtttt
tcggggagtctgtgtcaggtggacattgacgagtgtgccagcaccccctgcaagaatgga
gctaaatgcaccgatggtcccaataagtacacctgcgaatgtgctgagggttacacagga
cagcactgtgagactgatatcaatgagtgctactctgacccctgccactacggcacctgc
aaggatggcctagcctccttcacctgctactgccgccctggctacactggccgcttgtgt
gagaccaacattaatgagtgtcttagccagccctgcaagaacggtggaacttgccaggac
agggagaacacgtatatttgtgcttgccctaaaggcactgcaggtttcaattgtgaggtg
aacctggacgactgtaagagcaaaccctgtgactacgggagatgcattgacaaaatcaat
ggctacgagtgtgcatgtgaggctggctacacaggatcaatgtgtaacattaacattgat
gagtgtgccataaacccctgtcaaaacgggggcacgtgcattgatggcatcaacagcttt
acctgcctgtgcccagagggctacaacgacgccacctgtttatctcaggtggatgagtgt
ggcagcaacccctgcatccatggccgatgccaggacctcatcaatggctacaaatgtacc
tgcgactctggctggagcggccccaactgtgacatcaataataacgagtgtgagtccaac
ccgtgcatgaatgggggaacctgcaaggacatgaccagtggataccactgcacatgcaga
gctggatttactggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggtacctgcattgacgatgtggctggatacaagtgcaactgtttgctacct
tacactggtgaaaattgtgagatcctgctggcgccctgcagccccagaccctgtaaaaat
ggtggagtgtgtaaggaggctgaagactaccagagcttctcctgcatctgtcctgaagga
tggcaaggtcaaacttgtgagatcgatatcaacgaatgtgtgaagagcccatgccgcaat
ggtgctatatgccaaaacactatgggtggctaccagtgcaagtgtcagccaggttacact
ggccagaagtgtgagacagataccgatgactgcaaaccaaatccctgcagtaacggtggt
ctgtgtcgcgatagcatcgacactttcacgtgtacctgtctgcccgggtttcgtggcagc
agatgtgagcaggacataaatgagtgtgagagtaacccatgtaggaatggcgccaactgc
accgattgtgtcaacagctacacctgcacctgcccgcctggcttcagtggcatcaactgt
gagatcaacaccaatgactgcacagacagctcttgcttcaatggtggcacttgcgtggat
ggaattaatgcgttcacctgcctgtgtctacctggattcactggcagctactgccaatat
gacataaatgagtgtgactccaaaccgtgcctcaatggaggatcttgtcttgacagttat
gggacgtacaagtgcacctgtcctaatggctacacaggagtcaattgtcagaatcttgta
cgctggtgtgattcatcaccctgtaaaaatggaggttcatgctggcaacagggagcctct
tacacctgccagtgtcagactggatggactggtctctattgtgacatccccagtgtttcc
tgtgaagtcgcagcccaacagcaaggagtggaggtggttcacctgtgcaggaactcaggc
cagtgtctggatgctgggagcacacattactgccgatgccaggccggctacaccgggagt
tactgccaggaacaagtggacgagtgctcacccaatccttgccagaacggagcttcctgt
actgattatctgggaggctacagctgtgaatgtgtccctggctaccacggtgtaaactgc
tccaaagagatcaatgaatgtcagtcacagccctgtcagaatggaggcacgtgcattgac
ctcatcaacacgtataagtgctcctgtcccagaggaacacaaggtgttcactgtgagatt
aatttggatgactgcaccccctccagcgacccactgaccaacgagcccaagtgtttcaac
aacggcaaatgtgtcgaccgcattggaggttaccagtgtgtgtgtccagcaggctatgta
ggagagcgctgtgaaggtgacgtcaacgagtgtttgtcagacccctgtgaccccagaggg
tcctacaattgcattcagctcaccaacagctaccgctgcgagtgccgcactggatataca
ggtcaacgttgtgacaaagtgtttgatggctgtaaaggaagaccctgcagaaatggagga
tcatgtgctgttgctagtaacacacctcatggtttcatctgcaaatgtccacctggcttc
actggctcttcctgcgagtatgattctcgctcttgcgggagtctgaattgcaggaatgga
ggtacatgtgtgtcaggccacctaggcccacgctgcctttgtccaccaaccttcactggg
cctgagtgccagacccctactgatagcctctgcatctccaacccctgctacaatggtggc
acgtgccagatcacgccagacgtgcctttcttccagtgcagctgtcccagcaatttcaac
ggcctgttgtgccacatcctggactattcatttgttggaggttttggccgggacatcacc
ccaccaccagaagtagaggtgagctgcgagattcctcagtgtgacgagtgggcgggcaac
catatctgcgactcgctgtgcaacaaccatgcctgcggctgggatggaggagactgctca
cttaattttgatgacccgtggcaaaactgctctgcagccttgcagtgctggcgctacttt
aacgatgggaagtgtgatggccagtgcaacagtcctggatgtctctatgatggctttgat
tgtcagggacaggaaggacaatgcaatcctctgtatgaccagtactgtaaagaccactat
gccgacggtcactgtgaccagggctgcaacaatgccgaatgtgaatgggatggcctggac
tgcgccaacaacatgccagagaaactggcagacgggcacttagttctggtggtccatatc
cctcccgaacagcttaaaaatcgatcttcagccttccttagagacctcagcagcgttctc
cacaccaatgtggtgttccgccgtgacgccaaaggagaaccaatgatcttcccatactat
ggcaatgaacaggaccttgttaaacataacgtgctgaagcgctccacagatggctggccc
gagtgggcttcaatgccagtcaatgtgttgggtcaagtgaaggaaagtgtgtctgccatg
gtcagccctcgaaaacgcagagagctcgatcctgtgcaaatcaaagggtctgtggtgtac
ctggagattgacaaccgtcagtgttaccagcagtctagtgaatgcttccagagcgccaca
gatgtagctgcgttccttggagcactggccactagcgggaatctcaatgttccctatatt
gaagctgtcaccagtgtgagacctactcccaccatttcagagttctaccccatgtacata
gtcttcctcggtttggctgctttgggtttcatctgccttggtgttctggtgtcccgtaag
aggcgacgagagcacggccagctctggttacctgagggattcaaaacgtcagagcccagc
aaaaagaaacgcagagaaccattgggagaggattctgttggattgaggcccatgaaaaac
tcagacatcaatcttatggatgacaatcaaaatgaatgggatgatgaggatccagactgc
aggcgcttcaggttggaggaacaggccatgttggatttaagtgaccatactgaccacagg
aaatggacacagcagcatctggatgcagctgacctgcgtattgcatccattgctcctacc
ccacctcagggagagatagaaaatgactgcatggatgtgaatgtcagaggaccagatggt
ttcactcccctgatgattgcctcttgcagcggtggaggactagagactggtaccagtgaa
gaggaagaggatccatcagcagaaatcatctcggacttcatttaccaaggcgccaacctt
cacaaccagactgaccgcacaggcgagactgccctccacctggcggctcgctacgcccgc
tctgatgctgccaaacgtctcctggagtccagcgctgatgccaacgttcaggacaacatg
ggccgcactccacttcacgctgctgtggctgcagatgcacagggagtgttccagatttta
atccgaaaccgcgccactgatcttgacgcccgcatgcacgacggaacaacaccgctgatt
ctagcagcccgattggcggttgagggcatggtggaagagcttatcaactgccacgccgat
gctaacgccaccgatgattcagggaaatctgctcttcactgggccgcggctgtcaacaat
gtggaggcggcaatggtgctgctaaaaaatggtgccaacaaagacatgcaagacaacaag
gaggaaacaccgatcttccttgcagcccgggaaggcagctttgagacagctaaggttctc
ctggaacactttgccaatcgtgacatcaccgaccatctcgaccagctgcccagagatatt
gcccaggaacgcatgcactacgacatcgtccgccttctggatgagtacaatttggttagg
agtcccgggcttcacagtgaccccctaagcacctcaagcctctccccacctctctgctcc
cccaatgactaccttagcaacctcaagcccaccctgtctgtcaagaaggttcgaaaactt
agcgccggtggaaaaggagggaaggatgggggcaaagataatagaatgaagaagaaaaag
tcgctggatgggaagggcaacttgctggacacgtcagctgtcctctccccggttgagtcc
cttgagtctccgcatgggtacctgtcggatgtggcctctcctcccatgacatcacccttc
cagcagtccccacctatgtctctaaatcacctacaaggcaatggagaccacatgggccag
atgagcatgggtaaggatatgggctgtatgtcttttgaccctcacccactacgtctctcc
cacatgcctgtgtccagccccagcagtcagggaccaacatccataggtagcaacagagga
ggccagtgtgattggatctccaggatgcacccaggtgtcggccagcaaggaggctttacc
caggcaccaccaatatcccacaacatgatgggtgctctgcatggcgtcagcactgccact
ctgtctcagataatgggctaccagaatttgcagaccagccatctcggatctgcacacatg
atgcagcaggctcattcgcggcagctccagcaccaaaactccaactccaccacagctggc
cagtccctcaaccagagctttccaaacattgagctgaacggctccgacatgcagcaaaac
aacagccactctatgcccatccacaccgtaatgccccaggagacgcagatccttggcaac
caatttctcacccctccctctcagcacagctactctagccccatggacaacacaccaaac
caccagctgcaagtgcctgaccacccgtttctaactccctcccccggctcccctgaccaa
tggtccagctcgtccccacattccaacatgtccgattggtcggaaggcatctccagcccg
cctacaagtatccattcacagatgaatctgatcccagaccagtttaagtag
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