Empedobacter stercoris: HNV03_08460
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Entry
HNV03_08460 CDS
T06804
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
este
Empedobacter stercoris
Pathway
este00470
D-Amino acid metabolism
este00550
Peptidoglycan biosynthesis
este01100
Metabolic pathways
este01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
este00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HNV03_08460
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HNV03_08460
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HNV03_08460
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
HNV03_08460
Enzymes [BR:
este01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HNV03_08460
Peptidoglycan biosynthesis and degradation proteins [BR:
este01011
]
Precursor biosynthesis
Amino acid ligase
HNV03_08460
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
GARS_A
TAF
RimK
Motif
Other DBs
NCBI-ProteinID:
QNT14687
UniProt:
A0A9Q6V7R1
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All DBs
Position
complement(1752749..1753738)
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AA seq
329 aa
AA seq
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MLRVAVVAGGYSDESVVSLKSCELIYASLNPEKYDRTRVRILKEGWYAEIEGEKYPINKG
DFSFEKNGKKITFDVVFNTIHGTPGEDGYLQAYFEMIGLAYNGCPFYQSALTFNKKDCIA
VLSKYGIPHAKSIYINKGDQYVAKEILDQVGLPCFVKPNRSGSSLGISKVFKEEEFEAAM
QKAFQEDKEVLVESFLDGTEVSVGVLNYKGETMVLGITEIVSHTEFFDYDAKYNGLSDEI
TPARLTPEVEQRVREVAAKAYKCINMSGFSRSEYIIVNGKPHFIEMNTLPGFSPASIFPQ
QAAYAGIALEDLMDSEIEIALNRPSPWTE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttaagagtagcagttgtagcaggtggatactcggacgaaagtgtagtttcgttgaaa
agttgcgagttgatttacgcaagtctaaatccagaaaagtacgacagaacaagggttcga
atcttaaaagaaggttggtatgccgaaattgaaggcgagaaatatccaatcaataaaggt
gatttttcatttgaaaaaaatggaaaaaaaataacatttgatgtcgtttttaatacaatt
catggtacgccaggtgaagatggatatctacaagcgtattttgaaatgatcggtttggca
tataatggatgtcctttttatcaatctgccttaacatttaataaaaaagattgtattgca
gtattgagtaaatatggaattcctcacgcaaaatctatttatattaacaaaggagatcaa
tatgttgcaaaagaaattcttgaccaagtaggcttaccttgttttgtaaaaccaaatcgt
tcaggttcaagtttaggaatttcaaaagttttcaaagaagaagaatttgaagcagcaatg
caaaaagcttttcaagaagataaagaagttttggttgagtcttttttagatggaacagaa
gtttctgtaggtgtattaaattacaaaggagaaactatggtgttgggaattacagaaatt
gtttcgcacacagaattctttgattatgacgctaaatacaatggtttatcagacgaaatt
acgcctgcgcgtttaacaccagaagttgaacaacgtgtgcgtgaagttgctgcaaaagcc
tataaatgcatcaatatgtctggtttttctcgttctgaatatattatagtaaatggaaaa
ccgcattttattgaaatgaatacattaccaggtttttcacctgcaagtatttttcctcag
caagctgcttatgcaggaattgcgttggaagatttgatggatagcgaaatcgaaattgct
ttaaatagaccttcgccatggacagaatag
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