Edwardsiella piscicida C07-087: ETAC_04270
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Entry
ETAC_04270 CDS
T02509
Name
(GenBank) DNA-binding transcriptional activator TdcA
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etc03000
]
ETAC_04270
Transcription factors [BR:
etc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ETAC_04270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
NMT1
P22_Cro
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGH72985
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Position
981139..982080
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AA seq
313 aa
AA seq
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MNTFILPKTQHLVVFQEVIRSGSIGAAAKRLGISQPAVSKTISEMEDYFGIEVIIRKNTG
VTLTSAGQVLLNYSESITREMKNMVSEINSLSCSSVADVAFGFPSLIGFTFLSQMIKTFK
SVFPSAQVSMFEAQLSSFFPAIRDGRLDFAIGTLSDDMQLQDLHVEPLFDSEFVVVANKS
RSGSGPLTLDALRHEQWVLPQTDMGYYKQLLSILNKHQIDTANIIKTDSVVTIYNLVLNA
NFLTVIPCDMTTPFGSNQFMTLAIEDALPIAHYAAIWSKNYKIKKSALLLVELAKQYCPS
QCAKYKQPVAAEQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtttattctacccaaaacgcaacaccttgtggtctttcaggaggtcatcaga
agcggctcaattggggctgcggccaagcgtttggggatttctcaaccggcggtaagcaag
accatcagcgagatggaagactattttggtatcgaggttatcattcgtaaaaataccggc
gtcacgctgaccagcgcggggcaggtgctgctgaactattccgagtcaatcacccgtgaa
atgaagaatatggtcagtgagatcaatagtctgagctgtagtagcgtcgctgatgtcgcc
tttggctttccatccctgatcggctttacctttctgtcccagatgattaagacatttaaa
agcgtatttcccagcgcgcaggtgtcgatgtttgaagctcagctttcgtcctttttcccg
gcgatccgcgatgggcgtttggactttgccatcggtacgctgagtgatgatatgcagctg
caggatctgcacgttgaaccgctgtttgattcagagtttgtggtcgtcgccaataaatcg
cgaagcggcagtggcccgctgacgctggacgccctacggcatgagcagtgggtgctgccg
caaaccgatatggggtattataaacagctgctcagcattttgaataagcatcagattgac
actgcgaatatcataaaaaccgactcagtcgtcacgatctataatctggtgctcaatgcg
aatttccttaccgtgatcccctgcgatatgacgacccccttcggctcaaatcagtttatg
accctggcgattgaggatgcgctgccgatcgcacactatgccgcgatttggtcaaaaaac
tataagattaaaaaatccgcgctgctgttggtagagttggctaagcagtattgtccaagc
cagtgtgccaaatataaacagccggtcgccgccgagcagtag
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