Candidatus Endomicrobium trichonymphae Rs-D17: RSTT_116
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Entry
RSTT_116 CDS
T05087
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain (RecB)-like protein
Organism
eti
Candidatus Endomicrobium trichonymphae Rs-D17
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BAV58696
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Position
complement(204732..207806)
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AA seq
1024 aa
AA seq
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MNKSQIISVLASAGTGKTYNLAKRYLYLLLSSNDNTSIKNIIAVTFTNKAAVEMKYRVID
YLKKAALSLDTGDFFDELELTKDKIAQRSAAVLKDIFKFYDNFNISTIDSFKNRILKSCA
MSIDISPNFVIEQDYSDNLLFSLEIFLQKARTSENLRNIILQYLSQYLMKDSGWFPKNNI
YNEIEKVFKESGNTGKDIMPYEGVPFRNEIASRSAAIIRKIKKFAVLLPNIQAKKYYSEA
VEKVLSTGGKIFFSMDIPVRFAYETIKYIKDAKINAEADELWSEINKDIKSLCDFYMENY
YSVYSYIYSKVAFEFDLRSKKDGIVFLNEINKKTVGFFEKDNTVMPEVYYRLSEKYKHFL
IDEFQDTSLVQWVGIKRFLEESLAEGGTFFYVGDIKQAIYAFRGGEPEIFDAPSREFFSA
DVNIKTLNQNFRSGKTIVDFNNDIFSKENIERFLNEFYKKKNIECGFSKFIKTYSFLRQE
TPAEHNYGYIEIDVIDKTCENVKEKIKQRFINCVAQVSERFNPKDITTLCRANDEVLTVS
SWLLENDFDVESSQTLNIRNNSVIKQIISLLMFINSPIDALSFSSFILGDIFSKISGIEN
VEFEKFIFACNKRNRAGTFYKTFQDRYENLWDKYFKDFFVKDGFAPVYELTLAALEKFKV
TDNFSDSRAFIMRFLELVKDFETQGSGIKNFLEYFDDLKDNEESLYIKSALGNGIKVMTV
HKAKGLQFPVVIIPFLKLSVKPDRKPYFDSSGNKIKLFNISKNITKFSHKAKEIYDREKI
SSLLSELNVTYVSMTRAEYELYAIVPPKSGISNNEIPVLLGNKALTSGVKQTYAQDNNGK
DNIVKDSFDSGYKDIQKYLKNADKTTLDINNSSKKNSIICYALSKITSLKNKNINDCISY
ALRITKRKFFFEDVKFCREKLNRLFATKKILDLFMHDEKYICNEKKIVNSAGETFRIDKL
IVLDDEVITADFQISNDKEEKNKKQVEYRNTLIAEIYPGKKISAYIADIDTADCLLLKRQ
TLLL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctcaaataatttcagtgctggcatccgcaggaacaggcaaaacatataat
cttgcaaaaagatatctttatcttttgctcagttccaacgataacaccagcataaaaaat
ataatagctgtaacttttactaacaaagcggctgtagaaatgaagtacagagtcatagat
tatcttaaaaaagcagctttgtctttggataccggtgatttttttgacgagttagaactt
acaaaagacaaaatagcccaaagaagcgccgcagttttaaaagatatttttaagttttac
gataactttaacataagcaccatagacagttttaaaaaccgtatcttaaaatcctgcgct
atgagcattgatatttcgccgaactttgttatagagcaagattattcggacaatctttta
ttttccttagaaatctttctgcaaaaagcgcggacctcggaaaacctgagaaacattata
ttgcagtatctgtctcagtatttaatgaaagattccggttggtttcctaaaaacaatatc
tacaatgaaattgaaaaagttttcaaagagtcaggaaatacaggaaaagatattatgccg
tacgaaggagtacctttcagaaacgaaattgcttcaagaagtgcggcaattatcagaaaa
atcaaaaaatttgcagtacttcttcccaatattcaggcaaagaaatattattcggaagct
gttgaaaaagttttaagcaccggcggaaaaatatttttctcaatggatattcctgtaaga
ttcgcatacgaaaccattaaatacataaaagacgctaaaattaacgccgaagcagacgag
ctttggagcgaaataaacaaagatattaaatctctatgcgatttttatatggaaaactat
tacagcgtttattcatatatatactcaaaagtcgcatttgaatttgacctgcggtcaaaa
aaagacggcattgtatttttaaatgaaataaataaaaaaacagtcggtttttttgaaaaa
gataacactgttatgcccgaagtatattacagattatcagaaaaatataagcatttttta
attgatgaatttcaggatacgagccttgtgcagtgggtaggaatcaaaagatttctggaa
gaaagtcttgccgaaggaggaacgtttttctacgtcggcgacataaaacaagcaatatac
gctttcaggggcggggaacccgagatttttgatgcgccgtcaagggaatttttttctgcg
gatgtcaacataaagaccctcaaccaaaattttagaagcggcaagactatcgtagatttt
aacaacgatattttttcaaaagaaaatatcgagagatttctaaatgaattttacaaaaag
aaaaatattgaatgcggtttttcaaagtttatcaaaacttattctttccttcgtcaggaa
acgccggcagagcataattacggttatattgaaatagacgtaatagataaaacctgcgaa
aacgttaaagaaaaaataaaacaaagatttataaactgcgttgctcaggtatcggaaagg
tttaatcccaaagacataactactttatgcagagcaaacgatgaagtgcttacggtgagt
tcatggcttttggagaacgattttgacgtagaatcatcgcagactttaaatataagaaac
aacagcgtaataaaacagatcatatcactgcttatgtttattaactctcccatagatgcg
ctgtctttctcctcttttatccttggagatattttcagtaaaatttcaggtattgaaaac
gttgagtttgaaaagtttatttttgcctgtaacaaaagaaacagagctggaactttttac
aaaaccttccaagacagatatgaaaatctgtgggacaaatattttaaagatttttttgtg
aaagacggtttcgcacctgtctatgagttaactcttgcagcgcttgaaaagtttaaagtt
actgataatttttctgacagcagagcgtttataatgcgttttttggaactcgtaaaagat
tttgaaacacagggttcggggattaaaaactttttagaatatttcgacgatttaaaagac
aatgaagaatctttatatataaaaagcgctctcggaaacggcataaaagttatgacggta
cataaagcaaaaggacttcaatttcctgtagtgataattccttttctcaaactttcagta
aagcccgacagaaaaccgtattttgacagctcaggcaataaaataaaactgtttaacata
tcgaaaaacattacaaagttttcacacaaagctaaggaaatatacgacagagaaaagata
agttctttattgtctgaactcaatgtgacgtacgtttcaatgacaagagccgaatatgaa
ctttacgcgatagttcctccgaaatccggaatttcaaataatgagattccggtactactg
ggaaacaaagctctcacttcaggcgttaagcaaacatacgctcaggacaacaacggaaaa
gacaacattgtcaaagattctttcgactccggatataaagatatacaaaaatatttaaaa
aacgcagataaaacgacgcttgatataaacaacagcagtaaaaaaaattcaattatatgt
tatgccttgtcaaagataacgtcattaaaaaataaaaatataaacgactgtatcagttat
gcactcaggattacaaaaagaaaatttttctttgaagacgttaaattttgcagagaaaaa
cttaacagattatttgcaacgaaaaaaattctagatttgtttatgcatgacgaaaaatat
atttgcaacgaaaaaaaaatcgtaaattcggcaggcgaaactttcaggattgataagctg
atagtgcttgacgatgaagttataacagcagattttcaaatttcaaacgacaaagaagaa
aaaaataaaaagcaggtggagtatcgcaacactctcattgctgaaatttatcccggcaaa
aagatatcggcttatattgcagatattgacaccgcagattgtttattattgaaacgacaa
acgctactactttaa
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