Empidonax traillii (willow flycatcher): 114056350
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Entry
114056350 CDS
T05887
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
etl04144
Endocytosis
etl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114056350 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114056350 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
114056350 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114056350 (NEDD4)
04121 Ubiquitin system [BR:
etl04121
]
114056350 (NEDD4)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114056350 (NEDD4)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114056350 (NEDD4)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114056350 (NEDD4)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
HECT type E3
114056350 (NEDD4)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
114056350 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
114056350
NCBI-ProteinID:
XP_027737289
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MARRLRLHFATQRSNTDPLSETSEDVLDSNSCMYFKKSQNSAPNVTQVKLTPRRVAYAPV
VQQVINQETKPAISSLQIKKSSSLHISLQSRKHSGCSRFGDALATGEDTSFLGIGNEGNC
GARIVVDHRSNDSLLSSASLCKGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYSNSV
ISDSGSGTLWTSDSTFCSSVVHGDSSYRSTANKCNPYRSTSSQETLCRSSTTFDQDALSV
RKKTKIPLRRCSSLVIFPRSPSSTPPASPVSSGQPPHRGMYQTSHRLIISPNELAQKEDP
TTSKGFLSTAVNGLRLSKTVCSAGEVRDIRPLYLNPSLQDKSQTLSGSEQTTCEEVSDGF
SCVSVHLSQRPFASSSEVVNGSCSPELNLNSGAKYPHLRLERSTSACLPSKIDSEYQISI
SELERPNVQMNRTHHVLQRSVSLEGSRQKVSCCLSSLKYKCHSARTSQLHIQFKPGNEGK
TTGVKKRYGTSKKEMSSTSLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLH
PRSHKSRVKGHLRLKMTYLPKNNGSEEETTEQAEELEPGWIILDQPDAASQPQQQQQEPP
PLPAGWEERQDILGRTYYVNHEFRRTQWKRPTAQDNVAVADLGSVQLEAQHVFTHRRQIS
EETENVDNRDSPESWEIITEDEATMYSSQNLQIPLSQSNCDIQTHLAEELSNRLTTSGSS
ATGQSAAHTNHSSRRGSLQTYRLEEQPAHPVLLPTSSGLPPGWEERQDDKGRSYYIDHNS
RTTTWIKPVVQIATETSQVSAAPSISIGRQPQATSSDSSQQSSQQQPEMEQGFLPKGWEV
RHAPNGRPFFIDHNTKTTTWEDPRLKIPAHPRRKTSLDPVDLGPLPPGWEERTHTDGRIF
FINHNTKRTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRT
TILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEY
SATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPIT
LHDMESVDSEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKR
DYIHLVIQWRFVSRVQKQMTAFKEGFFELIPQDLIKLFDENELELLMCGLGDVDVADWKL
HTKYKNGYNINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLF
TVEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcggttaagattgcattttgctacccaaagaagcaacacagatccattatca
gagacctcagaagatgttttggacagtaatagttgtatgtacttcaaaaaatcacagaat
tctgcacctaatgttacacaagtgaaactgactcccaggcgagttgcttatgcacctgta
gtgcaacaagtcattaatcaggagacaaaaccagctatttcttcattgcaaataaaaaag
agcagttcgctgcacatttccctgcagtctagaaagcacagtggttgttctcgctttggt
gatgccttagctactggagaagacacttcattccttggaattggtaatgaagggaattgc
ggtgctcggattgtggtcgatcatcgatctaatgacagcctcctgagcagtgcctctctg
tgcaaaggcagcctcagcagtattgcagcaagtgacagtggatcctttagcagtgctggc
agtgactacggatcatgtgcaagtaccacaagtgatggaggttcctatagtaacagtgtc
atcagtgacagtggcagtggcaccctttggacaagtgacagcactttctgtagcagtgtt
gtacatggtgattcttcatatagaagcactgcaaacaaatgtaatccctacaggagcacc
tcatctcaggaaactctgtgtagaagtagcactacttttgaccaagatgctttgtcggtg
aggaagaaaacgaaaattccgttgcggcgttgttcatcactggttattttccctaggagt
ccttccagcactcctccagcttctccagtaagctcaggtcaaccaccacatagaggcatg
tatcaaacgtctcacaggctaattatttctcctaatgagctggcacaaaaagaagatcca
accacttccaagggattcctttcaacagcagtcaatgggcttagactgtctaaaacagtt
tgctctgctggcgaagtcagagacatccgaccgctttatttgaatccatcattacaggac
aaaagtcaaactttgagtggttctgagcagacaacttgtgaagaggtgtctgatggcttc
tcgtgcgtttcagttcatctcagccaaagaccatttgcatcgagcagtgaggtggttaat
ggctcttgcagtccagagttaaatctgaactccggtgcaaaataccctcatttaagactg
gaacgtagcacatctgcttgtctgccctcaaaaatagattcagaatatcagattagtata
agtgaactagaaagaccgaatgttcagatgaacagaactcaccatgttttgcaaagaagt
gtttccttggaaggatcacgtcaaaaagtttcttgctgcttatccagccttaaatacaag
tgtcacagtgcaaggacgtctcagttgcacatacaattcaaacctgggaatgaaggaaaa
acaactggtgttaagaaaagatatggaacctctaaaaaggaaatgtctagcacttctttg
tggaggccccataagactcgagatgattttcttggacaagtggatattcctctttatcag
ctaccgacagaaaatccaagtatggagagaccatatacgtttaaggattttgttcttcat
ccaagaagccataaatcaagagttaaaggccaccttagattaaaaatgacttacctacct
aaaaacaatgggtctgaagaagaaaccacagaacaggctgaagaattagagcctgggtgg
attatattggaccaaccagatgctgcgagccagccacaacagcagcagcaggaacctcct
ccactgcctgcaggctgggaagaaaggcaggacatccttggcaggacctactacgtcaat
catgagttcagaaggacacagtggaaaagaccaactgctcaggacaacgtggctgtggca
gatctgggcagtgtgcagctggaggcccagcacgtgttcactcaccggcgacagatatca
gaggagacagaaaatgtggacaacagagattcccccgagagctgggaaatcataactgaa
gacgaggcaacgatgtatagcagtcagaaccttcaaatccctctctcgcagagtaattgt
gacatacagactcatcttgcagaagaattgagtaacagacttactacctctggaagttca
gctactggccagtcagcagcccacactaaccattccagcagaagaggtagtctgcagaca
tacagacttgaagagcagcctgcacatccagtgttactgcccacttcatctggattaccc
ccaggctgggaagaacgacaagatgacaaaggaagatcatattatatagatcacaattct
agaaccactacctggataaagccagttgtacagattgctacagaaacaagtcaggtgtca
gctgcaccgagtatttctataggaagacagccacaagcaacatcaagtgactcatcacaa
cagtcttctcagcagcagcctgaaatggaacaaggattcctccctaaaggctgggaagtc
cgacatgcacccaatgggagaccattcttcattgaccacaacaccaaaactacaacatgg
gaagatccaagactgaaaattcctgctcacccgaggagaaagacttccctagatccagta
gatctgggcccattaccaccagggtgggaagagagaactcacacagatggaagaatattc
ttcataaaccacaatacaaagagaacacaatgggaggatccccgactgcagaatgtggct
ataactggaccagccgtgccttactccagggactataagcggaagtatgaattcttcaga
aagaaactgaagaaacagagtgatattccaaatagatttgaaatgaaaattcatcgcaca
acaatccttgaagattcttatagaagaattatagctgtaaagagagcggatttcctgaaa
gcaagactttggattgaatttgatggggaaaaaggtttagactatggaggagtggccagg
gaatggttcttccttctctctaaggaaatgtttaatccttattatggattgttcgaatat
tcagctacagataactatactctgcagatcaatccaaactctggactttgcaatgaagat
catctctcttatttcaagtttataggtcgtgtggctggaatggctgtttaccatggcaaa
cttttggatgcctttttcattcgtcctttttacaagatgatgctccaaaaaccaataaca
ctacatgatatggagtctgtggatagtgaatattacaattctctgaggtggattcttgaa
aatgatccaacagagctggacctcagatttatagttgatgaagaactttttggtcagacc
catcaacatgaactgaagagtggtggatcagaaatagttgtcaccaacaagaacaagaga
gactacattcatcttgtaattcagtggagatttgtgagcagagtgcagaaacagatgaca
gcttttaaagagggcttttttgaactaataccgcaggatctgattaaactttttgatgaa
aatgagctagagttattgatgtgtggactgggagatgtggatgtggctgattggaaacta
cacacaaaatacaagaatggctacaacataaaccatcaagtaatacagtggttctggaag
gcagtcttaatgatggactctgaaaagagaataagattacttcagtttgttactggcaca
tcccgtgttcccatgaatgggtttgctgagctgtatggttcaaatggaccacagttgttc
acagttgaacagtggggtacccctgaaaagctgccaagagctcatacctgctttaatcgc
ttggatttgcctccatatgactcatttgaagatttgtgggataaacttcttctagcgatt
gaaaacactcagggttttgatggggttgattaa
DBGET
integrated database retrieval system
