Empidonax traillii (willow flycatcher): 114057009
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Entry
114057009 CDS
T05887
Gene name
MGRN1
Definition
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
etl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114057009 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114057009 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114057009 (MGRN1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114057009 (MGRN1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114057009 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114057009
NCBI-ProteinID:
XP_027738552
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGSLLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDVDSPMEENGKQKVLYSL
EFTFDADARVAITIYCQATEEFVGGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIRAVVDEGDVVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSVDHDEHSSSDN
IPPGYEPISLLEALNGLRSVSPSIPSAPLYDEISYSGVVDGIPPTSRPLVAMDRALESGH
QKGKRSKSPDSTLRSPSSPIHEEDEEKLSEDSDSQPALSGGELVLRETSSPESVAGEEME
EASPVQQGGGRPPSVEDVLQDGGCGESRSLTRSESDPPVDVFLPGSSDYTKTLPVRGTGS
PVQPLLFEQTRLHLEDEQSLP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctcagccgccgcatcgcgggcgtggaggacatcgacatccaggccaac
tcggcctatcgctacccgcccaagtccggaaactactttgcaagtcacttctttatggga
ggggagaagtttgacacccctcaccccgagggctacctttttggggagaacatggatctg
aacttcctcgggaatagacctgttcagtttccctacgtaactccagctccacacgagcca
gtgaagacgctgaggagtttggtgaatatccgcaaagactctctccggcttgtgaggtat
aaagatgatgttgacagtcctatggaggagaatgggaagcagaaggtgctgtacagcctg
gagttcaccttcgacgcagatgcccgtgttgccatcacaatctactgccaggccacggag
gagtttgttgggggcatggcagtatacagcacaaagaatccctctctgcagtcggagacg
gttcattacaagagaggggtaagccagcaattctccctgccttccttcaagattgacttc
tcagagtggaaggatgatgagctgaactttgacctggatcgtggggtgttccctgtggtc
atccgagcagtggtggatgaaggggatgtggtagttgaggtcactggtcacgcccatgtt
ctcctggctgcgtttgaaaagcacgtcgacggcagcttttctgtgaagcccttaaaacag
aagcagatcgttgaccgggtgagctacctgctccaggagatctacggcatcgagaacaaa
aacaaccaggagaccaagccctcagacgacgagaacagcgacaacagcaacgagtgtgtg
gtttgcctgtcggacctgcgggacaccctcatcctgccctgcagacacctctgcctgtgc
aactcctgtgctgacaccctgcgctaccaggccaacaactgccccatctgcaggctcccc
ttccgtgccctgctgcagatccgggcggtgaggaagaagccgggggctctgtcgccggtg
tcgttcagccccgtcttggcacagagcgttgaccatgacgagcactctagctctgacaac
atccctccaggctacgagcccatttccttgctggaggcgctgaacgggctccgctccgtt
tccccctccatcccctctgctcctctgtacgatgaaatcagctactccggggtggtggat
gggatccctcccaccagccgcccgctcgtggccatggacagagccctggagagcggccac
cagaagggcaagcgcagcaagtctccagacagcacactacggtccccctcgtccccgatc
cacgaggaggatgaggagaagctctccgaggactccgactcgcagccggcgctgagcggg
ggtgagctggtcctgagggagaccagctctccagagagcgtggcaggggaagagatggag
gaggcctcgcctgtgcagcagggtggtggccgcccaccctcggtggaggacgtgctgcag
gacggcggctgcggcgagagccggagtctgacacggtccgagagcgaccccccggtggac
gtgttcctgccaggctcatccgactacaccaagacgctccccgtccgcggcaccggcagc
cccgtgcagccccttctcttcgagcagacccgtctgcacctggaggacgagcagagcctc
ccgtga
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