Empidonax traillii (willow flycatcher): 114060178
Help
Entry
114060178 CDS
T05887
Gene name
SMURF1
Definition
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
etl04144
Endocytosis
etl04340
Hedgehog signaling pathway
etl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114060178 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114060178 (SMURF1)
04350 TGF-beta signaling pathway
114060178 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114060178 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114060178 (SMURF1)
04121 Ubiquitin system [BR:
etl04121
]
114060178 (SMURF1)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114060178 (SMURF1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114060178 (SMURF1)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114060178 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
114060178 (SMURF1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
HECT type E3
114060178 (SMURF1)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114060178 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
HPS3_N
Motif
Other DBs
NCBI-GeneID:
114060178
NCBI-ProteinID:
XP_027745271
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MMVMMPQSAPDVITRKLCFTALTFLYLLFCFAVLCAKNLAKKDFFRLPDPFAKIVVDGSG
QCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAIS
RLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDS
GPGRPLSCFLEEPAPYTDTTGAAGGGGCRFGESPSQEQRLQAQRLRTPDLRAHAQTPQNR
PHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWE
VRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEEGEELPA
QRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVK
FRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHF
VGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVL
DHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGF
NELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDE
ERRARLLQFVTGSTRVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPY
ESYEKLYEKLLTAVEETCGFAVE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatgatgccgcagagcgcacctgatgtgattaccaggaagctttgttttacg
gccttaacatttctttatctgctgttttgttttgcagtattatgtgccaagaatcttgca
aagaaagatttcttcagacttcctgacccatttgcaaaaatagttgtggatgggtcaggt
cagtgccattccactgacactgtgaagaacacgttggaccccaaatggaaccagcattac
gatctatacgtcgggaaaacagattccataaccatcagtgtatggaaccataaaaaaatc
cataagaaacagggagctggcttcctggggtgtgtccgactcctctccaatgccatcagc
aggctaaaagatactggataccagcgtttggatctatgcaaactcaaccccacggacacc
gatgctgtccgaggccaaatagtggtcagtttacagacacgggacagaataggcacagga
ggttctgtagtagactgcagagggcttttggagaatgaaggaacggtctatgaagactcc
gggccgggcaggccgctgagctgtttcctggaggagccggcgccctacacggacacgacg
ggagcggccggaggaggcggctgccgcttcggggagtcccccagccaggagcagcggctg
caggcgcagcggctccgcacccccgacctccgagcccacgcccagacacctcagaaccgg
ccccacgggcaccaatcgccagagctgcccgagggctacgagcaaagaacaacggtacag
ggacaggtttattttttgcacacacagactggagttagcacatggcatgacccaaggata
ccaagagaccttaacagtgtgaattgtgatgaactgggacctctgcccccaggctgggaa
gtcagaagtacagtttcaggaagaatatattttgtagatcacaacaacagaaccacacaa
ttcacagatccacgactacatcacatcatgaaccatcaatgccagctgaaagagcccagc
cagcagcctttgccagctccaaatgagggatccctggaagagggggaggagttgcctgca
cagagatacgagagagacttggtacaaaagctgaaagtccttagacatgagctctccctt
cagcaacctcaggctgggcactgtcggattgaagtatccagagaggaaatatttgaggaa
tcctaccgtcagataatgaagatgaggccaaaggacttgaaaaagaggctcatggtgaaa
ttccgaggagaggaaggcctggactatgggggagtagcaagagagtggttgtatttactg
tgccatgaaatgttgaatccctattatggactcttccagtactccacagataatatttac
atgctgcaaatcaatccagactcttctatcaatcctgaccatttgtcttatttccacttt
gtggggcggataatgggtctggctgtgttccatggacactacatcaacggggggttcacc
gtgcccttttacaagcagctcctggggaagcccatccagctctccgacctggagtctgtc
gacccagaattacacaaaagcttagtctggatcttggagaatgacatcacccctgtcctg
gaccatacgttctgtgtggaacacaacgctttcgggaggattttacagcacgagctcaaa
ccaaatggcaggaatattccggtgacagaagagaacaagaaagaatatgtcaggttgtat
gtgaactggcggtttatgagaggaatagaggcacagttcctggctctgcagaaaggtttt
aatgaacttattcctcaacatctccttaagcctttcgaccagaaggaactcgagctcatc
ataggagggctggataagatagacctgaacgactggaagtccaacacccgcctaaagcac
tgcatggccgacagcaacatcgtgaagtggttctggcaggcggtggaaacctttgatgag
gagaggagggccaggctgctgcagttcgtgacgggctcgacgcgtgtcccacttcaaggt
ttcaaggctttacaaggcgctgcaggacccagactgtttaccatccatttaatagatgca
aacacagacaaccttccaaaagcccacacttgctttaaccggatcgacattccgccttac
gagtcatatgagaagctttatgagaagctgttgacagctgtggaagagacatgtgggttt
gctgtggagtga
Empidonax traillii (willow flycatcher): 114065996
Help
Entry
114065996 CDS
T05887
Gene name
SMURF2
Definition
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
etl04144
Endocytosis
etl04340
Hedgehog signaling pathway
etl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114065996 (SMURF2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114065996 (SMURF2)
04350 TGF-beta signaling pathway
114065996 (SMURF2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114065996 (SMURF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114065996 (SMURF2)
04121 Ubiquitin system [BR:
etl04121
]
114065996 (SMURF2)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114065996 (SMURF2)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114065996 (SMURF2)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114065996 (SMURF2)
Autophagy
Mitophagy
Other mitophagy associated proteins
114065996 (SMURF2)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
HECT type E3
114065996 (SMURF2)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114065996 (SMURF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
HPS3_N
Motif
Other DBs
NCBI-GeneID:
114065996
NCBI-ProteinID:
XP_027756141
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MSNPGARRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKL
GPNDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCFVDENTPITGTNGASCGQASDPRLAERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQHQQQQQVVSLCQ
LPDEAECLTVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRP
KDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAV
NPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMELVDPDLHNSLVW
ILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIE
AQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKANTRLKHCTPDSNIVKW
FWKAVELFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHT
CFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgggggcccggcggaacgggcccgtcaagctgcggctgacagtactgtgt
gcaaaaaacctggtgaaaaaggattttttccgactccccgatccctttgccaaggttgtg
gtggacggctctggccaatgccattctacagatactgtgaagaatacacttgatcccaag
tggaatcagcattatgacctgtacattgggaagtcggattcaataacaatcagtgtgtgg
aatcacaagaaaatccataaaaagcagggagctggttttctgggctgtgtgaggcttctc
tcaaacgccatcaaccgcctcaaagatactggttatcagaggttggatctgtgcaagctt
gggccaaatgacaacgatactgtcagaggacagatagtagtgagtctccagtccagggac
cggataggcactgggggacaagtcgtggattgcagtcggttgttcgacaacgatttgcca
gatgggtgggaggagcgcagaactgcctctggaaggatccagtacttaaatcacatcacg
cggacgacgcagtgggagcgaccgacacggccggcatccgagtactccagcccgggcagg
ccactgagctgctttgtggacgagaacactccgatcacgggcaccaacggcgcgagctgc
gggcaggcgtcagacccccggctggcagagaggagagtccgctcccagaggcacaggaac
tacatgagcaggacacacttgcacactcctcctgatctacctgaaggatatgaacaaagg
acgactcagcaaggccaggtttattttctgcatactcagactggtgtcagcacgtggcac
gatccaagagtacccagggatcttagcaacatcaattgtgaggagcttgggccgctgcct
cctggatgggagatccgaaacacggccacgggcagggtttattttgttgaccataacaac
aggacgacgcagttcacagacccgcggctctccgcgaacctgcacttggtcctaaaccgg
cagaaccagctgaaggaccagcagcaccagcagcagcagcaggtggtgtcgctgtgccag
ctcccggacgaggccgagtgcctgacggtgccgcgctacaagcgggacctggtgcagaag
ctgaagatcctgaggcaggagctgtcccagcagcagccccaggccggccactgtcgcatc
gaggtctccagggaggagatttttgaggaatcctacaggcaagtcatgaagatgaggccc
aaagacctgtggaaacgattaatgatcaaattccgtggggaggaaggccttgattatgga
ggagttgccagggagtggctctacctgttgtcccatgagatgctgaatccatattacggg
ctcttccagtattcccgagatgacatttacaccctgcagatcaaccccgactccgccgtc
aacccggagcacctgtcctatttccacttcgtgggccggatcatgggcatggccgtgttc
cacgggcactacatcgacggcggcttcacgttgcctttctacaagcagttgcttgggaag
ccaattactttggatgacatggaattggtcgaccctgatcttcacaacagcttagtctgg
atacttgagaacgacatcacgggcgtgctggaccacacgttctgcgtggagcacaacgcg
tacggggagatcatccagcacgagctcaaacccaacgggaagagcatccccgtcacagag
gagaacaaaaaggaatatgtcagactttacgtgaactggcggtttttacgaggaattgag
gcgcagttcctggcgctgcagaagggatttaatgaagtaatcccccaacatctgctgaag
acatttgatgagaaggagttggagctcatcatctgtggactgggaaaaatcgacgtgaac
gactggaaggcgaacaccaggttaaaacactgcacccccgacagcaacatcgtcaaatgg
ttctggaaagccgtggagctctttgacgaggagaggagggcgcggctgctgcagttcgtg
accggctcctcccgagtgcccctgcagggcttcaaggcactgcaaggtgctgcaggcccc
cggctcttcaccatccaccagatcgacgccagcaccaataatttaccgaaagctcatacc
tgcttcaacaggatcgacattcccccgtacgagagctacgagaagctctacgagaagctg
ctgacggccatcgaggagacgtgcggcttcgccgtggagtga
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integrated database retrieval system
