Empidonax traillii (willow flycatcher): 114070065
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Entry
114070065 CDS
T05887
Gene name
SMO
Definition
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114070065 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
etl04030
]
114070065 (SMO)
G protein-coupled receptors [BR:
etl04030
]
Frizzled / Smoothened family
114070065 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
114070065
NCBI-ProteinID:
XP_027763058
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MPKCEDGQVELPSQTLCQATRAPCTIVERERGWPDFLKCTTDRFPEGCPNEVQNIKFNSS
GQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEKEHREMHVYIAAFSSVTIFCTFFTLA
TFVADWRNSNRYPAVILFYINACFFVGSIGWLAQFMDGARDEIVCRADGTMRLGEPTSNE
TLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTYQPLLGKTSYFHLITWSIPFV
LTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIK
SNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLC
EANVTIATQTNKPIPDCEIKNRPSLLVEKINLFAMFGTGVSMSTWVWTKATLLIWKRTWC
RLTGQSDDQPKRIKKSKMIAKAFSKRKELLRDPGRELSFSMHTVSHDGPVAGLAFDINEP
SADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPEERANLWIVEADISPELQKRSS
RKKKRRKKKKEVDPGPERCLGGSTAPLAPSTVPRLPRLPPQPCLVAFAPDVLPGLPPGRP
DATFSGVPWDGHRRANVFHLISNPFCPEGGALEEESPGRWQHNGGPLWAPNPGGPRTQGR
RAGLAPIHSRTNLVDAELLDPDSDF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtgcgaggatgggcaggtggagctgcccagccagaccctgtgccaggccacc
cgggccccctgcaccatcgtggagcgcgagcgaggctggcccgacttcctcaagtgcacg
accgaccgattccccgagggctgcccgaacgaggtgcagaacatcaagttcaacagctcg
gggcagtgcgaggcgccgctggtgcgcaccgacaaccccaagagctggtacgaggacgtg
gagggctgcggcatccagtgccagaacccgctgttcaccgagaaggagcaccgcgagatg
cacgtctacatcgccgccttcagctccgtcaccatcttctgcaccttcttcaccctggcc
acctttgtcgctgactggaggaactccaaccgctaccccgctgtcatcctgttctacatc
aacgcctgcttcttcgtgggcagcatcggctggctggcgcagttcatggacggcgcccgt
gacgagatcgtgtgccgcgccgacggcaccatgcgcctgggggagcccacgtccaacgag
acgctctcctgcgtcatcatcttcgtcatcgtttactactcactgatgtcgggagtcatc
tggtttgtcatgctgacctacgcctggcacacctccttcaaggccctgggcaccacctac
cagccgctgctgggcaagacctcctacttccacctcatcacctggtccatccccttcgtc
ctcactgtggccatcctggccgtggcgcaggtggatggtgactctgtcagtggcatctgc
ttcgtgggctacaagaactaccgctaccgagccggcttcgtcctggcgcccatcgggctc
gtcctcatcgtggggggctatttcctcatccggggggtcatgacgctcttctccatcaag
agcaaccaccccgggctgctgagcgagaaggcggccagcaagatcaacgagaccatgctg
cgcctgggcatctttggcttcttggccttcggcttcgtcttcatcacctttggctgccac
ttctacgacttcttcaaccaggcagagtgggagcgcagctttcgggaatacgtcctgtgc
gaggccaacgtgaccatcgccacgcagaccaacaagcccatcccggactgcgagatcaag
aaccggccgagcctgctggtggagaagatcaacctcttcgccatgttcggcaccggcgtc
tccatgagcacctgggtctggaccaaggccactctgctcatctggaagcgcacctggtgc
aggctgacggggcagagcgacgaccagcccaagaggatcaagaagagcaagatgatcgcc
aaggccttctccaagcgcaaggagctgctgcgggacccgggccgggagctgtccttcagc
atgcacaccgtgtcacacgacggccctgtggccggtttagccttcgacatcaacgagccg
tcggctgacgtgtcctcggcctgggcccagcacgtcaccaagatggtggccaggagaggg
gccatcctgccccaggacatctccgtgacacccgtggcaacacctgtgccaccggaggag
agggccaacctctggatcgtggaagccgacatctcccccgagctgcagaagcgcagcagc
cgcaagaagaagcggaggaagaagaagaaggaggtggacccaggccccgagcgctgcctg
gggggctccacggcccccctggcccccagcaccgtccctcgcctgccccgcctgcccccc
cagccctgcctggtggccttcgcccccgacgtcctcccggggctcccgcccggccggccc
gacgccaccttctccggggtgccatgggatgggcaccgcagagccaacgtcttccacctc
atcagcaaccccttctgccccgagggcggggccctggaggaggagagccccgggcgctgg
cagcacaacgggggcccgctctgggcccccaaccccggggggccgaggactcagggccgc
cgggccgggctggcccccatccactcccggaccaacctggtggacgcggagctgctggac
cccgactcggacttctga
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