KEGG   Escherichia coli UMNK88 (ETEC, porcine): UMNK88_1384
Entry
UMNK88_1384       CDS       T02001                                 
Name
(GenBank) conserved hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
eun  Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:eun00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    UMNK88_1384
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:eun01002]
    UMNK88_1384
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:eun01011]
    UMNK88_1384
Peptidases and inhibitors [BR:eun01002]
 Cysteine peptidases
  Family C82
   UMNK88_1384
Peptidoglycan biosynthesis and degradation proteins [BR:eun01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   UMNK88_1384
SSDB
Motif
Pfam: Ldt_C YkuD LysM
Other DBs
NCBI-ProteinID: AEE55996
LinkDB
Position
complement(1350186..1351145)
AA seq 319 aa
MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANLGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq 960 nt   +upstreamnt  +downstreamnt
atgatcaaaacgcgtttttctcgctggctaactttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctggtt
ggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatataacgtcggctttctcgctctgttacaggctaacctcggcgttgatccttacgta
ccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgc
gaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcat
ggtacgaacgccgattttggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa

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