Escherichia coli UMNK88 (ETEC, porcine): UMNK88_3331
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Entry
UMNK88_3331 CDS
T02001
Symbol
gabT
Name
(GenBank) 4-aminobutyrate transaminase GabT
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00250
Alanine, aspartate and glutamate metabolism
eun00280
Valine, leucine and isoleucine degradation
eun00310
Lysine degradation
eun00410
beta-Alanine metabolism
eun00640
Propanoate metabolism
eun00650
Butanoate metabolism
eun01100
Metabolic pathways
eun01120
Microbial metabolism in diverse environments
Module
eun_M00027
GABA (gamma-Aminobutyrate) shunt
eun_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
UMNK88_3331 (gabT)
00650 Butanoate metabolism
UMNK88_3331 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
UMNK88_3331 (gabT)
00280 Valine, leucine and isoleucine degradation
UMNK88_3331 (gabT)
00310 Lysine degradation
UMNK88_3331 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
UMNK88_3331 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
eun01007
]
UMNK88_3331 (gabT)
Enzymes [BR:
eun01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
UMNK88_3331 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
UMNK88_3331 (gabT)
2.6.1.48 5-aminovalerate transaminase
UMNK88_3331 (gabT)
Amino acid related enzymes [BR:
eun01007
]
Aminotransferase (transaminase)
Class III
UMNK88_3331 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AP_endonuc_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AEE57878
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Position
3219255..3220535
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AA seq
426 aa
AA seq
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MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP
KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK
IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE
DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE
VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG
NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF
EDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC
FDEAKQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaataaagagttaatgcagcgccgcagtcaggcgattccccgtggcgttggg
caaattcacccgattttcgctgaccgcgcggaaaactgccgggtgtgggacgttgaaggc
cgtgagtatcttgatttcgcgggcgggattgcggtgctcaataccgggcacctgcatccg
aaggtggtggccgcggtggaagcgcagttgaaaaaactgtcgcacacctgcttccaggtg
ctggcttacgagccgtatctggagctgtgcgagattatgaatcagaaggtgccgggcgat
ttcgccaagaaaacgctgctggttacgaccggttccgaagcggtggaaaacgcggtaaaa
atcgcccgcgccgccaccaaacgtagcggcaccatcgcttttagcggcgcgtatcacggg
cgcacgcattacacgctggcgctgaccggcaaggtgaatccgtactctgcgggcatgggg
ctgatgccgggtcatgtttatcgcgcgctttatccttgcccgctgcacggcataagcgag
gatgacgctatcgccagcatccaccggatcttcaaaaatgatgccgcgccggaagatatc
gccgccatcgtgattgagccggttcagggcgaaggcggtttctacgcctcgtcgccagcc
tttatgcagcgtttacgcgctctgtgtgacgagcacgggatcatgctgattgccgatgaa
gtgcagagcggcgcggggcgtaccggcacgctgtttgcgatggagcagatgggcgttgcg
ccggatcttaccacctttgcgaaatcgatcgcgggcggcttcccgctggcgggcgtcacc
gggcgcgcggaagtaatggatgccgtcgctccaggcggtctgggcggcacctatgcgggt
aacccgattgcctgcgtggctgcgctggaagtgttgaaggtgtttgagcaggaaaatctg
ctgcaaaaagccaacgatctggggcagaagttgaaagacggattgctggcgatagccgaa
aaacacccggagatcggcgacgtacgcgggctgggggcgatgatcgccattgagctgttt
gaagacggcgatcacaacaagccggacgccaaactcaccgccgagatcgtggctcgcgcc
cgcgataaaggcctgattcttctctcctgcggcccgtattacaacgtgctgcgcatcctt
gtaccgctcaccattgaagacgctcagatccgtcagggtctggagatcatcagccagtgt
tttgatgaggcgaagcagtag
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