Eutrema salsugineum (saltwater cress): EUTSA_v10016150mg
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Entry
EUTSA_v10016150mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EUTSA_v10016150mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eus02000
]
EUTSA_v10016150mg
04147 Exosome [BR:
eus04147
]
EUTSA_v10016150mg
04090 CD molecules [BR:
eus04090
]
EUTSA_v10016150mg
Enzymes [BR:
eus01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
EUTSA_v10016150mg
Transporters [BR:
eus02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
EUTSA_v10016150mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10016150mg
CD molecules [BR:
eus04090
]
Proteins
EUTSA_v10016150mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_29
AAA_15
AAA_5
AAA_21
AAA
nSTAND1
AAA_30
SbcC_Walker_B
APS_kinase
AAA_25
DUF87
Rad17
ECH_2
Motif
Other DBs
NCBI-GeneID:
18026726
NCBI-ProteinID:
XP_006410867
UniProt:
V4LP12
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MQGLELLPEASSDKSNNNNNNSRNPETELREHPPPEMENGGGAPPPPPTIVEEPKKAEIR
GVAFKELFRFADGLDYVLMGVGSVGAFVHGCSLPLFLRFFADLVNSFGSNANNVDKMMQE
VLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQFFDTEVRTS
DVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFIVGFTAVWQLALVTLAVVPLIAVIG
GIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGESRASQAYSSALKTAQKLGY
KTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHLTNGGLAIATMFAVMIGGLALGQSA
PSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVKI
LNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDLKTLKLKWLRQQ
IGLVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVGERGL
QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLIIAHRL
STIRKADLVAVLQQGSVSEIGNHDELFAKGENGVYSKLIKMQEAAHETAMSNARKSSARP
SSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSIEASSYPNYRHEKLAFKDQANS
FCRLAKMNSPEWKYALLGSVGSVVCGSLSAFFAYVLSAVLSVYYNPNHDYMIKQIDKYCY
LLIGLSSAALIFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISAR
LALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKM
FMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYTANLEPPLKRCFWKGQI
AGCGYGVAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD
FIKGGQAMRSVFELLDRKTEIEPDDPDTTPVPDRLRGEVELKHIDFSYPSRPDIQVFRDL
SLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKSIRKHIAIV
PQEPCLFGTTIYENIAYGHECATEAEIIQAATLASAHKFISALPDGYKTYVGERGVQLSG
GQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIR
NAHVIAVIDDGKVAEQGSHSHLLKNQPDGIYARMIQLQRFTHTQVIGMTSGSSSRVKEDD
A
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggccttgagcttctccctgaagcctcctccgataaaagcaacaataataataac
aactcgagaaacccagaaacagagctccgggaacatcctcctccggaaatggaaaatggc
ggtggtgctcctcctcctcctccgacaatagtggaggagcctaaaaaagcagagattcgt
ggagttgctttcaaagagctattcagattcgcagatggattggattatgtattgatggga
gtcggctctgttggtgctttcgtccatggatgctccttacctctgtttctcagattcttc
gccgatctcgttaattcctttggttctaatgccaataacgtcgacaagatgatgcaagaa
gttctcaagtatgcgctttactttcttgtcgttggtgctgcaatctgggcttcctcttgg
gcagaaatttcttgttggatgtggactggagagagacaaacgacgaagatgaggataaag
tatttagaagcagctttaaaccaagacattcagttcttcgacacagaggttcgaacttcc
gatgttgtcttcgccattaacaccgacgcagttatggttcaagacgccattagcgagaag
ttgggtaatttcatccactacatggcgacttttgtttctggattcatcgtcggtttcacg
gcggtgtggcaactggctttagtaactctcgcggtggttccgttgatagccgtgatcgga
ggaatccataccaccactctctctaagctctctaacaagagccaagagtctctttcacaa
gctggtaatatcgtcgaacagacagtggtacaaatcagggtagtaatggcgttcgtggga
gaatcaagagcttcgcaagcttattcatcagctttgaagacagcacagaaacttggttac
aaaacaggtttagctaaaggaatgggacttggtgctacttacttcgtcgtcttctgttgc
tacgctctcttgctctggtacggtggctacttagttcgccatcatttgaccaacggtggt
ctcgcaatcgccacaatgttcgccgtcatgatcggtggattggcattgggacaatcagca
ccgagcatggctgcatttgcgaaagctaaagttgctgctgcgaagatctttagaatcatt
gatcataaacccacgatagagcgaaacagcgagtctggtgtggagctagattcagtcacg
ggtcttgttgagcttaaaaacgtcgacttttcgtatccgtcgagaccagatgttaagatc
ctcaacaacttctgcctctctgttcccgccgggaagactatagctttggtcggaagtagc
ggttcgggcaaaagcaccgtcgtttcgcttatcgagaggttttacgacccgacctcagga
caagttttactcgatgggcatgacctgaagacgctgaaactgaaatggttaaggcaacaa
ataggtcttgtgagccaagagcctgcactatttgctacttctatcaaagagaatatactc
ttaggccgtcccgacgcggatcaagtcgagatcgaggaggcggctcgagtcgcaaacgca
cattcctttatcatcaaactacctgatggattcgacacacaggtaggagagagaggattg
cagctctcaggggggcagaagcaaagaatagcaatagcaagagctatgttaaagaaccct
gcgatacttcttttggacgaggcaacaagtgctttggattctgaatcagagaagctcgtg
caagaagctttggatcgtttcatgattggaaggacgactctcatcatcgctcaccgtctt
tccaccattcgcaaagccgaccttgtagctgtgcttcagcaaggaagcgtctctgagatt
ggaaatcacgatgagcttttcgccaagggagaaaacggagtttactctaagctcatcaaa
atgcaagaggcagctcatgaaaccgccatgagcaatgcgagaaagagtagtgcgagacct
tcgagtgctagaaactctgttagctcaccgataatagctcgtaactcttcttatggaaga
tcaccatattcacggagactctcggatttctcaacttctgatttcagcctctccattgaa
gcttcttcgtacccaaactatcgacacgagaagcttgctttcaaggatcaagccaattct
ttctgcagactagctaaaatgaactctcctgagtggaaatacgctctgcttggttccgta
ggctctgtcgtttgcggctccttaagcgcgttctttgcttatgttctcagtgctgtgcta
agcgtctactacaatccgaaccacgattacatgatcaaacagattgataaatactgttat
ctcttgatcggtctctcttctgcagcgcttatcttcaacacgctccagcattctttctgg
gacattgtgggagagaatctgaccaagagagtccgtgagaagatgcttaccgctgtactc
aagaacgagatggcttggtttgatcaagaggagaatgagagcgcaagaatctcagcaaga
ttagctcttgatgccaataacgtgagatcagccattggagatagaatctcggtcattgtg
cagaacacagcgttgatgcttgttgcttgcactgctggttttgttctgcaatggagactt
gcgcttgtcctcgttgcagtcttccctgtagttgttgctgcaactgtgttacagaaaatg
ttcatgactggattctctggagacctggaagcggcgcatgcaaagggaacgcagctcgct
ggtgaagccatagctaatgtcagaacagtcgcggctttcaattcagaggcaaagattgtt
cgtctctacactgcaaacctcgagccaccattgaagcgctgcttctggaaaggacagatc
gctggatgtggctatggtgtagcacagttctgtctttacgcatcttacgctctagggcta
tggtacgcgtcgtggcttgtgaaacacggcatctctgacttctccaaaaccataagagtc
ttcatggttctgatggtctcagctaatggtgcagcagagacgctcacactggctcctgat
ttcatcaaaggtggtcaagctatgcggtctgttttcgaacttcttgaccggaaaaccgag
atcgaacccgatgatcctgataccaccccagtaccagaccggttacgtggcgaagtcgag
cttaaacacattgatttctcttacccttcaagacctgacatacaggttttccgagacctt
agccttcgtgctcgagctggcaagactctagctcttgtaggtccaagcgggtgcgggaaa
agctcggtgatttctctcatccagagattctacgaaccgtcctcaggccgagtcatgatc
gacggtaaagacataaggaagtataacttgaaatccataaggaaacacatcgccattgtc
cctcaagaaccgtgcttgttcggaacaaccatctacgaaaacattgcgtacggacacgag
tgcgcgaccgaagcagagatcatacaagccgcgactctagccagcgcacacaagttcata
tctgcgttgcctgatggttacaagacttatgtaggagagagaggcgttcagctctctgga
ggacagaaacagaggatagcgatcgctcgtgcactcgtgaggaaagcagagatcatgctg
ctcgacgaggccacaagcgctcttgatgcagagtcagagaggtcggtacaagaagcattg
gaccaggcttgctctggtagaacatcgatcgtggtggctcataggttgtctacaatcagg
aacgctcacgtgatcgctgtgatcgatgacgggaaagtggcggaacaagggtcgcattct
catcttctcaagaaccagcctgatggaatctacgcgcggatgatacagttgcagagattt
actcatactcaggtgattggtatgacgtcaggttcgagttctagggttaaagaagatgat
gcttag
DBGET
integrated database retrieval system
