Echinicola vietnamensis: Echvi_1858
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Entry
Echvi_1858 CDS
T02388
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
evi
Echinicola vietnamensis
Brite
KEGG Orthology (KO) [BR:
evi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
evi02000
]
Echvi_1858
Transporters [BR:
evi02000
]
Other transporters
Pores ion channels [TC:
1
]
Echvi_1858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec
CarboxypepD_reg
Big_3_5
CooC_C
Big_1
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AGA78113
UniProt:
L0FYK4
LinkDB
All DBs
Position
complement(2173233..2176343)
Genome browser
AA seq
1036 aa
AA seq
DB search
MERRITIFFISCLLLLPMLSYAQNNEITGNVTLKSNGEPLPGVAVMIEGSGTGTITDVDG
KYSIQAPSGSTLVFSLLGMKPQKVTISNQTNLNVQLEENLSALEEVVVVGYGVQKKSVVT
GAISSVKASDLESMPINRVEQALQGRTSGLTIASSSGQPGSGATVRVRGLTTFGNNDPLW
VVDGVVVDNGGIGYLNQSDIESIEVLKDAASQAIYGARAAAGVILVTTKKGEAGKIRVNY
NGYYGTSAPAKKLDLLDASQYAMIRNEAATNAGNTAPFSNPASYGAGTDWQDLIFNNSAQ
RQNHELSISGGNEKSTFYTSFGYLDQEGIVASEISKYKRINFRLNSEHQLASWLKVGQNL
GYAHDKSIGLGNTNSEFGGPLSSAINLDPMTPAIISDPNIAGQPPYSTNPVIRDAMGRPY
GISTIVAQEMTNPLAYTQTRLGNYSWSDNFVGNVYAEAEPIKGLKLRSTLGAKLSYWGSE
SFTPIFYLNATTVSNQTNFTRNQNRRFDWNLENTISYSKAIDQHNFTVLLGQGAYLDNRG
RSATVTFFNVPANNFEDASLNFKVPNDQRNADGSEGAGHTVSSLFARANYNYTEKYLLEA
LVRRDGSSRFGPNNRYGIFPSFSAGWVITQEAFWPTNPVVDFLKVRGGYGIVGNDNIGDF
AFLSTIGSGRNYTIGNTGSYVIGYSPNAPSNPDLKWEETSQANIGFEATLFGDFNITFDW
YKKVTKGILQNPRIPGYVGAISNPAANVADMENRGVELELGYRKMLGELELSLNGNISYL
ENEVTNLGTDISYLSGGQSFQASSYPITRTAVGQSMNSFYGFQTQGIFQTIEDVENYTNT
DGEMIQPNAQPGDFIWADLNKDGQITEADRTFIGNPTPTWSYGFTANFQWNNFDLVFFGQ
GVAGNKIFQGLRRLDISNANWQTEVLNRWTGPGTSNDYPRIVEGDPNKNFNNPSDFYLED
GDYFRIKTLQLGYTLPKNLISKVAMNRARVYVMSENLATFTKYSGYDPEIGGGVMSIDRG
IYPQARSYMLGVQIGF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagaattaccattttcttcatttcctgtcttctcctcctgcccatgctaagc
tatgcgcagaacaatgagataacaggtaacgtaacccttaaaagtaacggggagcccctc
cccggtgtagcagtaatgatcgaaggttccggcacagggaccattacagatgtagacgga
aaatactccatccaagccccctcaggaagtacactcgtttttagtcttttgggcatgaag
ccacaaaaagtcacgatcagtaaccaaaccaacctcaacgtccaactggaagaaaacctc
agtgcgctggaagaagtcgtcgtggttgggtatggtgtacagaaaaaaagcgtcgtcacc
ggagccatttccagtgtaaaagccagtgatttagaaagtatgcccatcaaccgggtagaa
caggccctccaaggacgtacctcaggacttaccattgcctccagctctggccaacccggt
tcgggggccacggtacgggttcgtggcttgaccacctttggcaataacgacccgctatgg
gtagtcgacggagtagtggtggacaacggcggaattggctacctgaaccaatccgacatc
gaatccatcgaagtactcaaagacgccgcttcccaagccatttatggtgccagggctgca
gccggagtgatccttgtcacgaccaaaaaaggtgaagctggcaaaattcgagtcaactac
aacggctattacggcacctctgccccagcgaagaagctggacctcctggatgccagccaa
tatgccatgatccgaaatgaagcggccactaacgcgggcaacaccgctccattctcaaat
ccggcaagttatggcgctggcacagattggcaggacttgatctttaacaacagtgcccaa
agacaaaaccatgaattgagtatcagtggtggtaacgaaaaatccactttttatacatct
tttggctatttggaccaggaaggcattgtcgccagtgaaatttcaaagtacaaaagaatc
aacttccgcttaaattcggagcatcaacttgcctcatggctaaaagtgggccaaaacctt
ggctatgcccatgacaaatccatcgggctgggaaacaccaacagtgaatttggcggaccg
ctcagttctgccataaacctggatccgatgaccccggcaattatctcagatcccaacatt
gccggtcagccgccgtacagcaccaatcctgtcatacgcgatgccatgggccgtccatac
ggaatttccaccatcgtggcccaggagatgaccaatccacttgcttacacccaaacacgc
ttgggcaattacagctggtcggataattttgtagggaacgtttatgcggaagccgagccc
atcaaaggacttaagttgaggtcaacattaggcgccaaactttcctattggggaagcgaa
tcatttacgcccatcttctacttaaacgccaccactgtttctaaccaaaccaactttacc
cgcaaccaaaacagaaggtttgactggaacctggaaaacaccatatcctactccaaggca
atcgatcagcacaatttcaccgttctgctagggcaaggagcttatttggacaatcgggga
agaagcgcaacagtaacgttcttcaatgtcccggcaaacaacttcgaggacgcatcccta
aacttcaaagtccccaatgaccagcgaaatgcggatggctcagaaggagcggggcatacg
gtaagttctctttttgcacgagccaattacaattataccgaaaagtatctcttggaagca
ctggtgcgaagagacggctcctctcggtttgggccaaacaaccgctacggcatcttccct
tccttttccgcaggctgggtgatcacgcaagaagcattttggccgaccaatcccgtagtg
gacttcctgaaagtccggggtggttatgggatcgtcggtaacgacaatattggcgatttc
gcctttctttccaccataggaagcggaaggaattacaccatcggaaatactggcagctat
gtcattggctatagccccaatgccccttccaatcctgacctgaagtgggaagaaaccagc
caagcaaacatcggttttgaagcgacgcttttcggcgatttcaacatcacttttgattgg
tacaaaaaagtcaccaagggcatcctccaaaaccctcgaattcccggttatgtgggcgcc
atctccaatccagctgccaatgtagcagacatggaaaacaggggcgtggaactcgaactt
ggctatagaaagatgcttggagagctagaattatccttaaacgggaacatttcttacctg
gaaaacgaagtcaccaatctgggcacagacatttcatatctctcgggagggcaaagcttc
caggcaagttcctaccccatcaccagaacggcggtcggacaatccatgaattccttctat
ggattccaaacgcaaggaatcttccaaaccatcgaagatgtcgaaaactataccaatacg
gatggtgaaatgatacagcccaatgcccaaccgggagattttatttgggcggacctaaac
aaagatggtcaaataacggaagcagacaggacctttatcggtaaccctacccctacctgg
tcttacggttttacggccaacttccaatggaataactttgacttggtattcttcggtcaa
ggggttgcagggaataaaattttccaaggactacgacgtctcgacatcagcaacgccaac
tggcaaacagaagtgctgaaccgatggacgggaccgggcacttccaatgactacccaagg
atcgtagaaggtgaccccaataaaaacttcaacaacccttctgacttctaccttgaggat
ggagattatttccggatcaaaacccttcagctgggatatacacttccgaaaaatctaatc
agtaaagtggctatgaaccgggcacgggtttatgtcatgagtgaaaacctcgccacattc
actaaatactcaggatacgatcctgagattggtggtggcgtgatgagcattgaccgcggc
atctatccgcaggccagatcttatatgttaggtgttcaaatcggcttttaa
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