Ficedula albicollis (collared flycatcher): 101809920
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Entry
101809920 CDS
T02815
Symbol
ATG16L1
Name
(RefSeq) autophagy related 16 like 1
KO
K17890
autophagy-related protein 16-1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04136
Autophagy - other
fab04140
Autophagy - animal
fab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101809920 (ATG16L1)
04136 Autophagy - other
101809920 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101809920 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101809920 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101809920 (ATG16L1)
Membrane trafficking [BR:
fab04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
101809920 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
101809920 (ATG16L1)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101809920 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
eIF2A
NBCH_WD40
Ge1_WD40
CCDC93_CC
Fez1
WD40_like
Lipoprotein_6
HTH_6
FlaC_arch
HEF_HK
PALB2_WD40
AP5B1_middle
Peptidase_M15_4
PKcGMP_CC
V_ATPase_I
KASH_CCD
FUSC
Motif
Other DBs
NCBI-GeneID:
101809920
NCBI-ProteinID:
XP_005050999
UniProt:
A0A803W1P7
LinkDB
All DBs
Position
9:6888276..6910482
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AA seq
562 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQRISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDDIE
VLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSISNIFGLSESPLLGHQSSDTARR
RSLSSLPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRR
VKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTESIVKELELFGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVKQT
FSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVTW
SPAGAHVVSVDKGNKAVLWSEF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagcccaggacatgatggcacatggaacgatgctcagctg
caggaactggcccagctgaagataaagcaccaggaggagctgactgagctgcacaagaaa
cgtggagagcttgcccagtctgtaattgatttgaacaaccaaatgcagcagaaggacaaa
gagatgcagatgaacgaagccaagattgcagagtatttgcaaaggatttctgaactggaa
acagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcagacactg
aaggatgaatatgatgctctccagatcaccttcaatgccttggaggagaagctaaggaaa
actactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaggccaggctgcagaag
gagctggcagaagctgccaaagagcccttgcctgttgaacccagggatgatgatatagaa
gtgctcgcagatgaaacctctgacacagctgaggaaacctctcccgtgcgagctgtcagc
cggacgtccagtaagcgactctcccagccagctggaggccttctggactctatcagtaat
atctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgccaggagg
cgttctctgtcctcactccctgcaccccaggataatgcagagccacatccaggtgccagt
aaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggaggtg
aatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggaccggagg
gttaagctttgggaagtattgggagataggtgtgagcccaaaggttccctctctggcagt
aatgctgggattacaagcatagagtttgatagtgctggttcttacctcttagcagcttca
aatgactttgccagcagaatctggacagtcgatgacaatcggttacggcacaccctgaca
ggtcacagtggtaaagttctgtcagccaagttcttgctggacaatgcacgtattgtttcg
ggaagtcacgaccggaccctcaagctctgggacctccgcagcaaagtttgtataaaaaca
gtgtttgcgggatctagctgcaatgacatcgtgtgtactgagcagtgtgtaatgagtgga
cattttgataagaaaattcggttctgggacatcaggactgaaagcatagtaaaagaactg
gagttgtttggaagaatcacagctctggacctgaacccggagcgaacagagctcctgacc
tgttcccgtgatgatctcctcaagatcattgatctgcgggtcagtgctgtcaagcagacg
ttcagtgcccagggattcaaatgcggctctgactggacgagagttgtgttcagccctgat
ggtaactatgtggctgctggctcagctgatggggccctctacatttggaatgtgcttact
gggaagttggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtcacgtgg
tccccagcgggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtgctgtggtct
gagttttga
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