Ficedula albicollis (collared flycatcher): 101815070
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Entry
101815070 CDS
T02815
Symbol
SNW1
Name
(RefSeq) SNW domain containing 1
KO
K06063
SNW domain-containing protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
fab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101815070 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101815070 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101815070 (SNW1)
Spliceosome [BR:
fab03041
]
Complex B
Other components
Prp19-related factors
101815070 (SNW1)
Complex C
101815070 (SNW1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
101815070
NCBI-ProteinID:
XP_005047539
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Position
5:complement(42042474..42060828)
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AA seq
538 aa
AA seq
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MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREITEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEIQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYGDDLEARIKTNRFVPDKEFSN
SDRNTRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctatcccaagatcagctagaacta
gaagaaagagcaagagctcagagatccaggcagactgctctggtctcatcacgaagggag
cctcccccatatggttaccggaaaggatggataccacgggtgctggaggattttggagat
gggggtgctttcccagaaatacatgtggcccaatatccattggatatgggccgaaagaag
aagatgtccaatgctttggctgttcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacagtcaaaggacaaggttatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaactgcaaagaccagatgaggaggcaatt
agagagataacagagaagacaagagcagccttggagaaatcagtctcccaaaaagttgca
gcagccatgccagttcgagctgctgacaaactagctcctgcacagtacattcggtacaca
ccatctcagcaaggagttgcattcaactctggagcaaaacagagagttattcggatggtg
gaaatgcagaaggaccctatggagcctccaagattcaaaattaacaagaagattccacga
ggaccaccatctcctccagcacctgtaatgcactctccaagtagaaagatgactgtgaaa
gagcagcaagagtggaaaattcctccgtgcatttcaaactggaaaaatgcaaagggttac
accattccattagataagcgtctggctgcagatggcagaggactgcagactgttcatatt
aatgaaaactttgccaaacttgctgaggcgctctatattgctgacagaaaggctcgtgag
gcagtagagatgcgtgcccaggtggagaggaagatggctcagaaagaaaaggagaaacac
gaggaaaagctccgagaaatggctcagaaagccagggagagaagagcagggatcaaaacc
cacgttgaaaaagaggatggagaagctagagaaagagacgagatcagacatgacaggcgc
aaagagagacagcatgacagaaatctttcccgggcagcccctgataaaaggtcaaagctg
caaagaaatgagaacagagatatcagtgaagttattgccctgggggtgcccaaccccagg
ccatccaatgaaatccaatatgaccagaggctgttcaaccagagcaaggggatggacagt
ggctttgctggaggagaagatgaaatttataatgtttatgaccagccttggagaagtggc
aaggatatggcccaaaatatctacaggccaagtaaaaatgtggataaggacatgtatggt
gatgatctagaggctcgaataaagaccaacaggtttgttcctgacaaagagttttccaac
tcggaccgtaacaccagaggcaggggcagggatggaccagttcaatttgaggaggatcca
tttggtttggacaagtttctggaagaagctaagcagcatggtggttctaaacggccatca
gacagcagccgccctaaggaacatgagcatgagagcaaaaagaggaggaaggactga
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