Fervidibacillus albus: OE104_10315
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Entry
OE104_10315 CDS
T08860
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
faf
Fervidibacillus albus
Brite
KEGG Orthology (KO) [BR:
faf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faf03009
]
OE104_10315 (rlmD)
Enzymes [BR:
faf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
OE104_10315 (rlmD)
Ribosome biogenesis [BR:
faf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OE104_10315 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_32
Methyltransf_11
Ubie_methyltran
Methyltransf_4
UPF0020
PrmA
TehB
Motif
Other DBs
NCBI-ProteinID:
WAA08990
UniProt:
A0A9E8LTA5
LinkDB
All DBs
Position
complement(2109400..2110779)
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AA seq
459 aa
AA seq
DB search
MKKSGNIRIRKGQTFPLTIKRIGINGEGVGYYKKQVVFVPGALPGEEVLVEATNISNKFA
EGKIKKIRKKSPHRVKPACPIYWECGGCQLQHVQYEEQLKAKREIVIQALERHTKFSVEN
MDIRPTIGMDNPWGYRNKSQFQVGMDKGKVIAGLYSVNSHRLIDIPNCPVQHPATNKAVS
IVKQILADLRVPIYDERKKTGVVRTIVARIGIQSGELQIVLITATKELPRKELIVKEIQK
RLPETKSIIQNINGRKTSLIFGDRSVLLAGEETIQEALGDLHFELSARAFFQLNPAQTIH
LYDEVKKAAQLTGKEKVVDAYCGVGTIGLWLAKDAGEVRGMDVIREGIDDARKNAKRHGM
KNVRFEVGKAEDVMPKWVKSGWRPDVVVVDPPRSGCDDALLETILKVEANRVVYVSCNPS
TLAKDLNTLSKKYKIEYIQPVDMFPQTAHVETICLMSRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctggaaacattcgcatacgaaagggacaaacctttccgctgacaattaaa
cgaataggtataaacggcgagggggtcggatactacaaaaaacaagtcgttttcgttccc
ggtgctttacctggggaagaggtgctggtagaagcgacgaacatttccaataaatttgct
gaagggaaaatcaaaaaaattcgaaaaaaatctcctcatcgcgtgaaaccggcttgtcca
atttactgggaatgcggtgggtgtcaattacaacatgtccaatacgaggaacaattgaaa
gcaaaacgggagatcgttatccaagcgttggagcggcatacgaagttttccgtcgaaaac
atggacattcgcccgacaatcggtatggacaatccgtggggttaccgaaacaaaagccag
ttccaagttggaatggacaagggaaaagtcattgcaggattatactctgtgaattcccat
cggctgattgacatcccgaactgtccggttcaacatccagcgacgaataaagcggtatcc
atcgtaaaacaaattttggcggatttacgcgtccccatttacgacgaacgaaaaaagacc
ggtgtggttcgaacaatcgtcgctcgtatcggtatccaatcgggggagttacaaatcgta
ttaattaccgccacgaaggaactaccgcggaaggaattaatcgttaaagaaattcaaaaa
cgacttccggagacaaaatcgattatccaaaatattaatggaaggaaaacatctctcatt
ttcggtgatcgatcggttcttcttgctggtgaagaaacgattcaagaagcactcggtgat
ctccatttcgaattatcggctcgagcctttttccaactgaatccagctcaaacgattcat
ttgtacgatgaagtaaaaaaggcagcccagttaaccggaaaagaaaaggtcgtcgatgcg
tattgcggtgtgggaacaatcggactttggctcgcgaaagatgcgggggaagtccgagga
atggacgtcattcgggaaggtattgacgatgcaaggaaaaatgcaaaacgccacggaatg
aaaaatgtccgtttcgaagtcggaaaggcggaagacgttatgccgaaatgggtaaaatcc
ggttggcgtcccgatgtcgtcgtcgtcgatcctccacgatccggctgtgacgatgccttg
ttggaaacgattttgaaagtggaagcaaaccgcgtcgtctacgtctcctgcaacccatcc
acattagcgaaggacttaaacacactaagcaaaaaatacaaaatcgaatacatccaaccg
gtggacatgtttccacaaacggcgcatgtggagaccatttgcttgatgtctagaaaataa
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