Flavobacterium agricola: K5I29_02665
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Entry
K5I29_02665 CDS
T09474
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fag
Flavobacterium agricola
Brite
KEGG Orthology (KO) [BR:
fag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fag03009
]
K5I29_02665
Enzymes [BR:
fag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
K5I29_02665
Ribosome biogenesis [BR:
fag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K5I29_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UYW01840
LinkDB
All DBs
Position
547540..548577
Genome browser
AA seq
345 aa
AA seq
DB search
MKDDINLEIEEGNLFEHYSFEAGKGQAPLRVDKFLMNLVENATRNKIQKAAENGNIFIND
VPVKSNAKVKANDVVRVLMEQPPFENIIIPENIPLNIVYEDDQLLVINKPAGLVVHPGHG
NYTGTLVNALAYHFDNLPLNSSERPGLVHRIDKDTSGLLVCAKTEFAMSYLAKQFEEKTS
EREYIAIVWGNVEEDEGTIESYIGRHLKDRMQMASFDDEAHGKWAVTHYKVIERLGYVTV
VSCKLETGRTHQIRVHMKSIGHTLFNDERYGGNLILKGTTFTKYKQFIDNCFKTLPRQAL
HAKTLGFEHPITKEFMRFDSDIPEDMVSVIEKWRIYAKSQSEYID
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatattaatttagaaattgaagaaggaaatttatttgaacattactcattc
gaggctggtaaagggcaagcgcccctgcgtgtagataagtttttaatgaatttagttgaa
aatgctacacgtaacaaaattcagaaagctgccgaaaacggaaatatttttataaacgat
gtgccggtaaaatcaaatgctaaagtaaaagcgaatgatgtggttcgtgtacttatggaa
cagccgccttttgaaaatataattattccagaaaacataccattaaacattgtttacgaa
gacgatcagcttttggtaattaacaaacccgctggtttggtagtgcatccgggacacgga
aattataccggaaccttagtaaacgcattagcttatcattttgataacttacctttaaac
tcaagcgagcgtccaggcttagttcatcgtattgataaagatacatcaggtttattggtt
tgtgctaaaacagaatttgctatgagctatttagccaagcagtttgaagaaaaaacttcg
gagcgtgaatatattgctattgtttggggaaatgtggaagaagatgaaggtacgattgaa
agttacattggccgacatttaaaagaccgcatgcaaatggcatcttttgatgatgaagcg
cacggaaaatgggccgtaacgcattataaagttattgaacgtttggggtatgtaaccgta
gtttcttgtaagttagaaacgggacgtacgcatcaaattagagtgcacatgaaatcaatt
gggcataccttatttaatgacgaacgctatggcggtaatttaattttaaaaggtacaacc
tttaccaagtacaaacaatttatagataattgttttaaaaccttaccaagacaagcttta
catgctaaaactttaggttttgagcacccaataacaaaagaatttatgcgatttgattct
gacattccagaagatatggtaagcgttattgaaaaatggcgcatctatgctaaatcgcaa
tccgaatatatcgattaa
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