Frankia alni: FRAAL4378
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Entry
FRAAL4378 CDS
T00384
Name
(GenBank) putative DNA helicase
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_30
AAA_19
DUF559
AAA_16
MeaB
Helicase_RecD
nSTAND3
AAA_22
UvrD_C_2
Fer4_NifH
UvrD-helicase
TgMIC1
CbiA
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAJ63020
RhizoBase:
FRAAL4378
UniProt:
Q0RHK6
LinkDB
All DBs
Position
4754901..4759439
Genome browser
AA seq
1512 aa
AA seq
DB search
MRSRSLRLLDYLAALAAERRGAPRRQLADYSPAPIGPAAVPTHADVRLGPTARRDSWLDI
DRTAPPRPPAWPRALDAILTSTGVNPDAPPTLPSPAPPARPSRPDGTGPNVATGVDTGAG
VPVQAAVLAEPATRHGDAAASLTDPTPESEPPDPRAALLDAWVRDVWRPWAPGARAARDA
RALYQRLFDLRLALQRDDATTELVWGHGVLCWRVGDAVISHPLLVTRMVATLDPDSGVIR
LHPDGPTSLETEPLHGLGLPGLDELSALRDRLRGAPVDPWDAPGRAEVFRQIIAPLGLDA
RLVEGPVLPSPGAAPVLVDTWVLYARPRPALQAQFYGDLRTALTERDVIPEAIAAVVAEE
ALVAEALGGDGAGAGDGPPSGPGRWDRGGPGAAPGLGVDASGGLGERLLMPLTANADQER
IARQLAVSRGVTVQGPPGTGKSHTIANLICHLVAHGQRVLVTAQDEQALGVLRAKIPPEL
RDLSVAVLGSSRADLDELRAAVVEISGALSDVDPARETAAVKALAEELDAARAHARTLEL
RMIDLLAAQAREFELPHGRERAPAVAAWLAERDGELSFIPDRLDPTRALPLDPAELALLY
RTAREIGPADARALAQEQPDAAALPDAVALARLYAELDEVRDGLADLELAGLSVTALDAL
GDAGAQALVDDARDGAERARRLSAGWLTAARAQCADSDAQAEFWAAQAAELAAEVTRLRG
LTARTFGRPVEVPDGDPRVHLRLLGELRERYAAGRGVPRLGGRELRELRDAVRVDGLVPH
TADDVAVAEAEVRRRQALAATVSRQGAIAAALGGEPVQAGALDVLTRLDAVARDLADAVD
WERRGRPELAARLRAVAPGAGDGSDPAALSRLADLLAAAAGRRREQEVTARLAALARTLD
DGGRSPRAGRLWGELQQALTRRDLAAWDALLGEATRLAALRPDAAARTRLAERLRAVAPL
WTDAILDRPGDAAAAAGGDPARAAAAWRWRQAQTWLDDLHADGDLALLGRQLGDASEQAR
RLVLDTARRAARLGLATRLGDPQRRALTGWVQALDRLGKGTGKYAPHWRAQARAHMRAAM
GAVPVWIMPTYRVMESFDPGSDDLFDVVIVDESSQCDILSLGVLSLGRRAVVVGDDAQTS
PEAVGIDRARVGALIDAHLPDVAQRSLLDVEASLYDTAARVFPRTVVLKEHFRCLPDIIG
FSNRFYDHQILPLREDPELAIGAALRPVRVTDGARTQTRFGDANPAEAQAIVEQVLACCA
DPAYDGMTMGVVTLLGAGQPRLIEHALVERLGEREFSRRALRVGDPYQFQGDERDVVFVS
VVADDNRSAATRRRDLQRVNVAASRARNQMWVFHTVDPATLREDDIRRQLIEYTYAGATP
QATGRLVDRCESEFERAVLREILGRGYRVRPQHPVGRYRIDLVVEGAPRPPAPDGTGAGR
VRGPRLAVECDGDRFHGPDQWEADLRRQRILERLGWTFIRIRGSEFYRHPTRTLDGLWRR
LAELDIHPDVGD
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagccggtcgcttcggctgttggactatcttgccgcgctcgccgccgaacggcgt
ggcgccccccgccgccagctcgccgactactcccccgccccgatcggcccggccgccgtg
cccacgcacgcggacgtccgcctcggcccgacggcccggcgcgactcctggctggacatc
gaccggacggcgccgccccggccaccggcctggccacgcgcgctcgacgccatcctcacg
tccaccggggtgaatccggacgcgccacccacgctcccctcccccgctccccccgccagg
cccagcaggcccgacggcaccggcccgaacgtcgcgaccggcgtcgatacaggcgccggt
gtcccggtgcaggcggcggtgctcgcggagccggccacgcggcacggcgatgccgcggcc
tcgctgacggatccgacgcccgaatctgagccgcccgatccgcgggccgcgttgctggac
gcctgggtgcgtgacgtctggcggccctgggcgccgggggcgcgggcggcgcgggatgcc
cgcgcgctctaccagcgcctgttcgacctgcggctggccctgcagcgcgacgacgccacc
accgagctcgtgtgggggcacggcgtgctgtgctggcgggtcggcgacgccgtgatcagc
catccgctgctcgtcacgcggatggtggcgacgctcgatcccgactccggcgtcatccgc
ctgcatcccgacgggccgacgagcctggagaccgagccgctgcacggcctcgggctgccc
ggcctcgacgaactctccgccctgcgcgaccggctgcgcggcgcgccggtggatccatgg
gacgcccccggccgcgcggaggtgttccgccagatcatcgcgccgctcgggctggacgcc
cgcctcgtcgaggggccggtcctgccgtcgcccggtgcggcgcccgtcctcgtcgacacc
tgggtgctgtacgcgcggccgcggcccgccctgcaggcgcagttctacggtgacctgcgc
accgccctcaccgaacgcgacgtcattcccgaggcgatcgcggcggtcgtcgccgaggag
gcgctcgtcgccgaggccctcggcggcgacggcgctggcgctggtgacgggccaccgtcc
ggcccgggtcgctgggaccgcggcggtccgggcgcggcgccgggcctcggtgtcgacgcc
tccggtggcctgggcgagcggctgctcatgccgctgacggccaacgccgaccaggaacgg
atcgcccgccagctcgcggtttcccgcggcgtgaccgtgcagggcccgccgggcaccggc
aagagccacaccatcgcgaacctgatctgccatctcgtcgcgcacgggcagcgcgtgctc
gtcaccgcgcaggacgagcaggccctcggcgtcctgcgcgccaagattccgccggagctg
cgcgacctgagcgtcgccgtgctggggtcaagccgcgccgacctcgacgagctgcgtgcc
gccgtggtggagatctccggggcgctcagcgacgtcgaccccgcgcgggagaccgcggcc
gtcaaggcgctcgccgaggagctcgacgcggcccgcgcccacgcccgcactctcgaactg
cgcatgatcgacctgctggcggcccaggcccgcgagttcgagctgccgcacgggcgggaa
cgggcccccgcggtggcggcgtggctcgccgagcgggacggcgaactgtcgttcatcccc
gaccggctcgacccgacccgggcgctgccgctggacccggcggagctcgcgctgctctac
cgcacggcgcgcgagatcggccccgccgacgcccgcgcgctcgcccaggagcagcccgac
gccgccgcgctgccggacgcggtcgccctggcgcggctgtatgccgaactcgacgaggtc
cgcgacggcctcgccgacctggagctggcgggcctgtcggtcaccgcactcgacgccctc
ggcgacgccggggcgcaggcgctggtggacgacgcccgcgatggcgccgagcgggcgcgg
cggctttcggccggctggctcaccgccgcgcgggcgcagtgcgccgactccgacgcgcag
gccgagttctgggccgcgcaggccgcggagctggcggccgaggtcacgcggctgcgcggg
ctcaccgcgcggaccttcggccgcccggtcgaggtgcccgacggcgacccgcgggtgcac
ctgcgcctgctcggggagctgcgcgagcgttacgccgccgggcgcggggtgccgcggctc
ggcgggcgggagctgcgggagctgcgcgacgcggtccgcgtcgacgggctcgtcccgcac
accgcggacgacgtggccgtcgccgaagccgaggtgcgccgccgtcaggcgctggccgcc
acggtgtcccgccagggcgcgatcgccgccgccctcggcggcgaacccgtgcaggccggt
gcactcgacgtcctgacccggctggacgcagttgcccgagacctcgccgacgccgtcgac
tgggaacggcggggtcgcccggagctcgccgcacggctgcgcgccgtggcccccggcgcc
ggtgacggcagtgatccggccgcgctgtcccggctggccgacctgctcgccgccgcggcc
ggccgccgccgcgaacaggaggtcaccgcgcggctcgcggcgctcgcacggaccctcgac
gacggtggccgcagcccacgggccggccggctgtggggcgagctgcagcaggcgctgacc
cgccgcgacctcgccgcctgggatgcgctgctcggcgaggccacccggctggccgcgctg
cgtcccgacgcggccgcgcgcacgcgcctggcggagcggttgcgtgcggtcgcgccgctg
tggaccgacgccatcctcgaccgccccggcgacgcggccgccgcggccggtggtgacccg
gcgcgggccgcggcggcgtggcgctggcggcaggcccagacctggctcgacgacctgcat
gccgacggcgatctcgcgctgctcggccgccagctcggcgacgcctccgagcaggcccgc
cggctcgtgctcgacaccgcccgccgggccgcccgcctcgggctcgcgacccggctcggg
gatccgcagcgccgcgcgctcaccggctgggtgcaggccctcgaccggctggggaagggc
accgggaagtacgccccgcactggcgggcgcaggcccgcgcccacatgcgcgccgcgatg
ggcgccgtacccgtgtggatcatgccgacgtatcgggtgatggagagcttcgacccggga
tccgacgacctcttcgacgtcgtcatcgtcgacgagtccagccagtgcgacatcctctcc
ctcggcgtgctcagcctgggccggcgcgccgtggtcgtcggcgacgacgcccagacgagc
ccggaggccgtcggcatcgaccgggcccgggtcggggcgctgatcgacgcccacctgccc
gacgtggcccagcggtccctgctcgacgtggaggcgagcctctacgacaccgccgcccgg
gtgttcccgcggaccgtggtgctcaaggagcacttccgctgcctgcccgacatcatcgga
ttctccaaccgcttctacgaccatcagatcctgccgctgcgggaggatccggagctcgcg
atcggcgccgcgctgcgccccgtgcgcgtcaccgacggcgcccggacgcagacccgcttc
ggcgacgccaacccggcggaggcacaggcgatcgtcgagcaggtcctcgcctgctgcgcc
gaccccgcctacgacgggatgacgatgggcgtggtcaccctgctcggcgccgggcagcct
cggctcatcgaacacgccctggtcgagcggctcggcgagcgggagttctcccggcgggcg
ctgcgcgtcggcgacccgtaccagttccagggcgacgagcgcgacgtcgtgttcgtctcc
gtcgtcgccgatgacaaccgttccgcggccactcgccgccgtgacctgcagcgcgtcaac
gtcgccgcgagccgcgcccgcaaccagatgtgggtgttccacaccgtcgacccggcgacg
ctgcgcgaggacgacatccgccgccagctcatcgaatacacctacgccggcgcgacgccg
caggccaccggccgcctcgtcgaccgctgcgagagcgagttcgaacgcgccgtcctgcgc
gagatcctcggccgcggctaccgggtccgcccccagcaccccgtcggccgctaccgcatc
gacctcgtcgtcgaaggagcaccccgtccgccggcacccgacggcacgggcgccgggcgc
gtccgcggcccccggctcgccgtcgaatgcgacggcgaccggttccacggccccgaccag
tgggaggcggacctgcgccgccagcgaatcctggagcggctcggctggacgttcatccgc
atccgcggctccgagttctaccgccatcccacccgcacgctcgacggcctgtggcgccgg
ctcgccgagctcgacatccacccggatgtgggcgactga
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