Flavobacterium ammonificans: SHINM13_07940
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Entry
SHINM13_07940 CDS
T08737
Symbol
mur_alr
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00300
Lysine biosynthesis
fao00470
D-Amino acid metabolism
fao00550
Peptidoglycan biosynthesis
fao01100
Metabolic pathways
fao01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHINM13_07940 (mur_alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHINM13_07940 (mur_alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHINM13_07940 (mur_alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SHINM13_07940 (mur_alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
SHINM13_07940 (mur_alr)
Enzymes [BR:
fao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SHINM13_07940 (mur_alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SHINM13_07940 (mur_alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
Precursor biosynthesis
Amino acid ligase
SHINM13_07940 (mur_alr)
Racemase
SHINM13_07940 (mur_alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BDB56498
LinkDB
All DBs
Position
964003..966447
Genome browser
AA seq
814 aa
AA seq
DB search
MKISIQNSISNLNAQFIGDCSDYTIDSISIDSRSLQNSATSLFFALVGPNNDAHHYIEDL
IRQGVRYFVVNHIPENCLGKANFLVVKDTLIALQQLAISYRSQYDFPIIGITGSNGKTIV
KEWLNFLLSPDFNIIRSPKSYNSQIGVPLSILGINSQHNLGIFEAGISTVAEMEKLQDII
RPTIGILTNIGSAHDEGFASIGEKIKEKLRLFSNCNTLIYNKNKTIDAFLNPRLNTFSWS
FNDKEADVFIQKISGIENTQFQVKYKLNSFDFTIPFQDNASIENAIHCVMVLLYFNYDPL
IIESRIRLLYPVEMRLKLKNGINGTTLIDDSYSSDFQSLKIALDFLESQKHHKKKTVILS
DIFQSGLSNEELYSKVSQLIIANKINRVIGIGKTISEFKHKFVNCSTYATTHEFIEQFDS
DNLRNETILIKGARSFHFEEIVTAFEEKTHETVLEVNLNAISNNLSFYKSKLKPETKMMV
MVKAFSYGNGGVEIAKLLEHHCVDYLGVAFADEGIALKNAGIQLPIMVLNPETTSFEAII
QYQLEPEIYSLKGLNAFLKLAEQKNLRHFPIHIKLDTGMHRLGFESNTIEELIAALKGNQ
HVIVKSILSHMATSDAVEHLDFSLHQIKLFEILSQQLMVELDIQPIRHILNTSGISNFTH
GQYDMVRLGIGLYGISNDQEEQKQLENVSTLKSVISQIRTISEGESVGYGRRFVANCSTD
VATIPIGYADGISRLWGNEVGYVSINKQKAAIIGSICMDMLMVNVTGINCVEGDPVIIFG
DSPTVIEIAQKTHTIPYEILTSISQRVKRIFYRE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatccatccaaaatagcatttcaaatctcaatgcccaattcattggagattgt
agtgattacacgattgattctatatcgatagacagtcggtcattgcaaaatagcgctaca
agtttgttttttgcacttgtagggccaaataacgatgctcatcattacattgaggatttg
attcgtcaaggagttcgttattttgtagtcaatcacatacctgaaaattgccttggtaaa
gctaactttttagtagtcaaggatactttaatcgccttacaacaattagcaattagctat
cgaagtcaatatgattttccaataattggcattactggaagtaacggaaaaacgatagtt
aaagaatggcttaactttctattaagcccagattttaatatcataagaagtcccaaaagt
tataattctcaaattggagttccgctctcaattttagggattaatagccagcacaattta
gggatttttgaagcaggtatttccacagtagctgaaatggaaaagttacaagatattatt
cgtccaacgattggtatcttaactaatataggatctgcacatgatgagggatttgcttcc
ataggagaaaaaattaaagagaagcttagattgtttagtaattgcaacacattaatatat
aataaaaacaaaacaattgatgctttcttaaatcctaggttgaatactttttcttggagt
tttaatgataaagaagcagacgtttttatccaaaaaattagtggaatcgaaaacactcaa
tttcaggtaaagtataaattaaacagtttcgattttaccataccttttcaagacaatgct
tctattgagaatgcgattcactgcgtgatggtattgttatattttaactatgatccttta
attattgagagtagaatacgattgctttatcctgtagaaatgcgacttaaactaaagaat
ggaattaacggaactacccttattgatgatagttatagttccgattttcagtctttaaaa
atagcattagattttttagaaagtcaaaagcatcacaaaaaaaagacagttatactttct
gatatttttcagagtggactgtctaatgaggagttgtattctaaagtgtcacaattaatt
attgctaataaaataaatagggtaatcggaattggaaaaacaatttcggagttcaaacac
aagtttgttaattgctcaacttatgccaccactcatgagtttattgaacaatttgatagt
gataatttacgaaatgaaacgattctgataaaaggtgctagaagtttccattttgaagaa
attgttactgcttttgaagaaaaaacgcatgagacggtactagaagtgaatttgaatgcg
attagcaataatttaagtttttataaatcaaaattgaagccagaaaccaaaatgatggta
atggtaaaggcttttagttatggcaatggcggagtagagatagctaaattattagagcat
cattgtgttgattatttgggagttgcatttgcagacgagggtattgcattaaaaaatgca
ggaattcaattgccaattatggttttgaatccagaaacaaccagttttgaggcaatcatt
caatatcaattagaaccagaaatatacagtttgaaagggcttaatgcttttcttaaactt
gcagaacaaaaaaacttaagacattttcctattcatatcaagttggatacaggcatgcat
cgtttgggctttgaatccaacactattgaagagttaattgctgccttgaaaggaaatcaa
catgtaattgtcaaaagtattttatcgcacatggccacgagtgatgcagtcgaacacctt
gatttttcattacatcaaattaagttatttgaaatcttatctcaacaattgatggttgaa
ttagatattcaacctattcgtcatattctaaacacttctgggataagtaattttactcac
gggcaatatgatatggttcggttagggattggattgtacggaatttctaacgatcaggaa
gaacaaaaacagttagaaaatgttagtactttaaaatcagtcatttcacagattagaaca
atttcagaaggtgaaagtgtagggtacggaaggagatttgttgctaattgctcaacagat
gtagccacgatccctattggatatgctgatggaatctccaggttatggggaaatgaagta
ggctatgtttcgataaacaaacaaaaagcagcaattataggtagtatatgtatggacatg
ttgatggttaatgttactggaattaattgtgttgaaggtgatccggttattatttttgga
gattctccaacggtaattgagatagcacaaaaaacacatacgattccgtatgaaatttta
accagtatttcacaacgtgtgaaacgtattttttatagagaataa
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