Flavobacterium ammonificans: SHINM13_17420
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Entry
SHINM13_17420 CDS
T08737
Name
(GenBank) transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fao03000
]
SHINM13_17420
Transcription factors [BR:
fao03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SHINM13_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
MarR
HTH_11
HTH_20
GerE
HTH_34
Mga
HTH_41
Fe_dep_repress
HTH_5
HTH_IclR
TrmB
Motif
Other DBs
NCBI-ProteinID:
BDB57446
LinkDB
All DBs
Position
complement(2006077..2006556)
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AA seq
159 aa
AA seq
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MSKFRLDEVDHQILDMLIDNTRVPFTDIAKKLLISAGTVHVRVKKMEDAGIIMGSSLVLD
YDKLGYSFIAYVGVFLNNTSQTKFVLERINEIPFVTVASVTTGKFNIFCKIRAKDTKHAK
DVIFMIDDIDGVYRTETMISLEESINDKKRLMHTIFKNM
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtttcgtttagatgaagtagatcaccagattttagatatgttaatcgacaat
actagagtcccttttacagatattgctaagaagttattaatttcagcaggaacggttcat
gtacgcgtaaaaaaaatggaagatgctgggattattatgggttcttctttagttcttgat
tatgataaattaggttattcatttattgcatatgtaggtgtttttcttaataatacctct
caaactaaatttgttctagaacgtataaatgaaattcctttcgtaactgtagcttcagtt
actacaggaaaatttaatattttttgtaaaattagagctaaagatacaaagcatgctaaa
gatgttatcttcatgattgatgatattgatggggtatacagaaccgagacaatgatttca
ttagaagaaagtattaacgataaaaaacgtttaatgcataccatttttaaaaacatgtaa
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