Rhodobacteraceae bacterium SC52: G5B39_07045
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Entry
G5B39_07045 CDS
T06457
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00260
Glycine, serine and threonine metabolism
faq00630
Glyoxylate and dicarboxylate metabolism
faq00785
Lipoic acid metabolism
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01200
Carbon metabolism
Module
faq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5B39_07045 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B39_07045 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G5B39_07045 (gcvP)
Enzymes [BR:
faq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
G5B39_07045 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QIE41730
UniProt:
A0A858CKR5
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All DBs
Position
complement(1442967..1445813)
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AA seq
948 aa
AA seq
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MPFTPTDYLPYDFANRRHIGPSPEEMAQMLDVVGAGTLDILIDETVPDDIRQDEPLELGR
AMSESELLLHMRKVAGRNKVLTSLIGMGYHDTITPPAIQRNVFENPAWYTSYTPYQPEIS
QGRLEALLNFQTMVCDLTGLDVANASLLDEATACAEAMTMAQRGAKSKATAFFVDENCHP
QNIALIRTRAEPLGLTVIVGAPEDLDPAAVFGAIFQYPGTYGALQDFTAPIAALHEHKAL
GIVIADPLALTLLKEPGAMGADIAVGSMQRFGVPLGFGGPHAAYLACKDAYKRSLPGRIV
GVSVDSHGTPAYRLSLQTREQHIRREKATSNVCTAQALLAVMSSFYGVFHGPKGLRAIAE
RVHRKTVRLARGLTDAGFSVEQDAFFDTITVNVGPMQGVLLKSAVAEGLNLRPVGDSRIG
IALDECTRTETIEAVWRAFGITRSDDDFTAHYSIPDALLRTTDYMTHPVFHMNRAETEMM
RYMRRLSDRDLALDRAMIPLGSCTMKLNSAAEMMPVSWPEFARIHPFAPDDQVQGYHQMI
SDLSDTLCKITGYDAMSMQPNSGAQGEYAGLLTIASYHRSNGDHERTICLIPVNAHGTNP
ASAQMAGMQVVVVGCTERGDIDVADFRKKAEAAGDRLAACMITYPSTHGVFERTVREVCE
ITHSFGGQVYLDGANLNAMVGLSQPGKIGADVSHLNLHKTFCIPHGGGGPGMGPIGVRAH
LAPHLPGHPFTGGEAGPVSGAPFGSPSILPISWAYCLMMGGDGLTQATKVAILNANYIAK
RLDGAFPILFKGDNGRVAHECILDTRPFAQHGVTVDDIAKRLIDHGFHAPTMSWPVSGTL
MVEPTESETKAELDRFCDAMLAIRDEIDAIAAGEMDKDNNPLKNAPHTTSDLIAEWDRPY
SREAGCFPVGAFRVDKYWPPVGRVDNVYGDRHLVCTCPPLESYQDAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcacccccaccgactaccttccctacgatttcgccaacaggcgccacatcggc
ccctcacctgaggaaatggcccagatgctggacgtcgtcggtgcggggaccctcgacata
ttgatagatgaaaccgttcccgacgacattcgacaggacgagccgctggaacttggccga
gccatgtcggaaagcgaattgcttttgcacatgcgcaaggttgcaggtcgcaacaaggtt
ctgacatcgctgatcgggatggggtatcacgacacgatcacgccgccggcgatccagcgc
aacgttttcgaaaacccggcgtggtacacgtcgtacacgccatatcagcctgaaatcagc
caagggcggcttgaggcgttgctgaatttccaaaccatggtttgcgatctgaccgggctg
gatgttgcaaacgcatcgctgcttgacgaagctaccgcctgtgccgaagcgatgacgatg
gcgcagcgcggcgcgaagtccaaagccacagccttcttcgtggacgaaaactgtcacccg
cagaatattgcgttgatccgcacccgtgccgaaccgcttggcctgaccgtcatcgtcggc
gcacctgaggatctggacccggccgccgtctttggggcaattttccagtatcccggcact
tacggcgcgctgcaagacttcaccgcgccaatcgctgccctgcacgaacacaaggccttg
ggtattgtcattgctgaccctctggccctgacactgctcaaagagccgggcgcgatgggg
gcggatattgctgttggatccatgcagcgctttggcgtgccactgggatttggcggaccg
catgctgcctatctggcgtgcaaggatgcctataagcggtcccttcccggccgcatcgtc
ggcgtctcggtcgatagccatggcaccccggcctacaggctatcgctgcaaacacgcgag
caacatatccgccgcgaaaaggccacgtcgaacgtgtgcacggcacaagccctgctggcg
gtcatgtcatcgttttacggggtttttcacggccccaaaggactgcgcgccattgccgaa
cgtgtgcaccgcaaaaccgtgcgccttgcgcgcggcctgactgatgctgggttttcggtc
gagcaagacgcctttttcgacacgatcacagtcaatgtcgggccgatgcagggcgttctt
ctgaaatccgctgtggctgaagggcttaacctgcgcccggtcggcgacagccggatcggt
atcgcgctggacgaatgcacccgcacagaaacgatcgaagccgtgtggcgtgcctttggc
atcacccgcagcgatgacgactttacggcgcattattccatacccgacgccctgttgcgg
accaccgactatatgacccacccggtgttccacatgaaccgggccgagacagaaatgatg
cgttacatgcgccgcttgtctgaccgggatctcgccttggaccgggcaatgatcccgctt
ggctcgtgcacgatgaaactgaactcggcagcagaaatgatgccagtcagttggcccgaa
tttgcgcgcatccatccctttgcgccagacgatcaggtccaaggctaccatcagatgatt
tcggatctgtccgatacattgtgcaagatcacaggctatgacgccatgtcgatgcagccc
aattccggcgcacagggcgaatatgccggcctgttgactatcgcgtcctatcaccgatcc
aatggcgatcatgagcggacgatctgcctgatcccagtcaacgcccatggcaccaacccc
gcgtcggcacagatggcagggatgcaagtggtggtcgtcggttgcaccgaacgcggtgac
attgacgtggccgacttccgcaagaaagccgaagctgccggcgaccgtctggcggcctgc
atgatcacctatccctcaacgcacggagtgtttgaacgcacggtgcgcgaagtttgcgag
atcacgcacagctttggcgggcaggtctatctggacggggccaacctgaatgcgatggtt
ggcctaagccaacccggcaagattggggccgatgtcagccacctgaacctgcacaagacg
ttctgcattccacacggcggcggcggaccgggcatgggcccaatcggtgtgcgcgcgcat
cttgccccccatttgcccggccatccgtttaccggcggcgaagccgggccggtcagcggc
gcgcccttcgggtcgccttcgatccttccgatcagttgggcatattgtctgatgatgggc
ggggatgggttgacgcaggccaccaaggtggcgatcctgaacgccaactacatcgcaaag
cggctggacggggcctttccaattctcttcaagggcgacaatgggcgcgtggcccatgaa
tgcatcctcgacactcgaccctttgcccaacacggcgtcaccgtggacgacatcgcaaaa
cggctcattgatcatgggttccacgccccgacaatgagctggccggtcagcggcaccttg
atggtagagccgacagaaagcgaaaccaaggcagagctggaccgcttttgcgatgccatg
cttgcgatccgggacgaaatcgatgccattgccgcaggcgagatggacaaagataacaac
ccgctcaagaacgcgccgcacacgacgtccgatctgattgccgaatgggatcggccctat
agccgcgaggcggggtgcttcccggttggtgcgttccgggtcgacaagtattggccgccg
gttggccgggtggataacgtctatggggatcgccaccttgtctgcacctgcccgccgctt
gaaagctatcaggacgcagctgaataa
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