Rhodobacteraceae bacterium SC52: G5B39_07875
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Entry
G5B39_07875 CDS
T06457
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
faq03021
]
G5B39_07875 (rpoH)
Transcription machinery [BR:
faq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5B39_07875 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
HTH_11
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QIE41881
UniProt:
A0A6G6F8I2
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All DBs
Position
complement(1601104..1602000)
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AA seq
298 aa
AA seq
DB search
MATYGNLPAPSPEQGLNRYLQEIRKFPMLEPEQEYMLAKRWVEDQDTGAAHQMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKSRIGALEDGDLRPENVAKIAHDLNVTEDEVISMNRRL
SGGDASLNATIGSEDDGSAQWQDWLEDEDADQAGSYAEQDELSVRRELLAEAMNVLNDRE
KDILVQRRLQDKAITLEDLSSQYDVSRERIRQIEVRAFDKLQTRMRELASEKGLVSAE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggccacttatggaaatcttcccgcaccttccccggaacaagggctgaaccggtatctg
caagagatccggaagttccctatgcttgaaccagagcaggaatacatgctggccaagcga
tgggtcgaagaccaagacaccggcgctgcgcaccagatggtgacgtcgcacctgcgtctc
gcagcgaaaattgccatgggttatcgcggctacggtctgccgcaagcagaagtcatttcg
gaagcgaatgttggcttgatgcaggcggtcaaacggtttgatccggagaagggctttcgt
ctggcgacatatgcgatgtggtggattcgcgcctcgattcaggaatacatcctgcgatcc
tggagtcttgtgaagctcggaacgaccagcgcacagaagaaactgttcttcaacctgcgc
aaagccaagtctcgcattggcgcgttggaagatggtgacctgcgtcccgaaaacgtcgcc
aaaatcgcccatgacctgaacgtgacggaagacgaggttatctcgatgaaccgtcgcctt
tcgggcggggatgcatcgctgaacgcaacgatcggatccgaagatgatgggtcagcgcaa
tggcaagattggctggaagatgaagacgccgatcaggcgggcagttatgctgaacaagat
gaactgagcgtgcgccgtgaactgcttgccgaagcgatgaacgtgctgaatgaccgcgaa
aaggacattcttgttcagcgtcgccttcaggacaaggccatcacgctcgaagacctctca
tcgcagtatgacgtcagccgcgaacgcatccgccagatagaagtgcgggcgtttgacaag
ttgcagacacgcatgcgcgagttggcgtcggaaaagggtcttgtatccgccgaatga
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