Rhodobacteraceae bacterium SC52: G5B39_12370
Help
Entry
G5B39_12370 CDS
T06457
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faq03009
]
G5B39_12370
Enzymes [BR:
faq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
G5B39_12370
Ribosome biogenesis [BR:
faq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
G5B39_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QIE42651
UniProt:
A0A858CPB4
LinkDB
All DBs
Position
2517600..2518769
Genome browser
AA seq
389 aa
AA seq
DB search
MTPAARVAAAIELLDDILAGAPTEKALTVWARGHRFAGSKDRAAIRDLVYDAMRRRRSLA
AIGGAQTGRGIMIGLARTDETDLESVFSGVGYGPAPLSDEEKAAGTAPSEGAEALDCQDW
LWPEFKASLGEEAAAKAMAALQARAPVHLRVNTRRTTLPEVQAQLAAAGSETQPHPLSPT
ALEVVSGARRLRNDPSVLSGAVEFQDAASQAVSDLVPLPEGGRFLDYCAGGGGKTLAIGA
RVRAELVAHDAAPRRMADLPARAARAGLAVRCVEPGNLASEGGFDTVLVDAPCSGSGSWR
RDPQGKWALTPERLTELTALQGEILDLAARHVLPNGRLIYVTCSMLAQENGAQVAGFLAR
HPDWTGTGTRQFTPADGGDGFFFAELIAP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgcagcgcgcgtcgccgcagcgattgaactgttggatgacatcttggccggc
gcgccgacagagaaggcgctgaccgtgtgggcgcgcgggcacagatttgccgggtccaag
gacagggctgcaatccgggatctcgtttatgatgcgatgcgccgccgtcggtcactcgcc
gccataggcggtgcccaaacagggcgcggcatcatgatcggcctcgcccggacggatgaa
actgatctggagtcggtcttttctggtgttgggtatggacccgcaccactgagcgacgaa
gagaaagccgctggtacagccccctccgagggcgcagaagcattggattgtcaggattgg
ctgtggcctgaattcaaggcaagccttggggaagaggcggcggcgaaggcgatggcagca
ctgcaagcccgcgcgccagtgcatttacgcgtcaacacccgccggaccacccttcccgag
gtgcaagcccagttggcggctgccggaagtgagacgcaaccacatccattgtcgccaaca
gcgcttgaagttgtgtcgggggcacggaggttgcgcaatgacccttcggttctctcgggg
gccgttgaatttcaagatgcggcgtcgcaggccgtgtctgatcttgttcctctgcccgag
ggtggccgtttcttggattattgcgcagggggcggtggtaaaactctggcaattggtgcg
cgggtgcgggccgaattggtggcccatgatgcggcaccgcgccggatggcggatttgccc
gcccgcgctgcgcgcgccgggctggctgtgcgctgcgttgagccgggcaaccttgccagc
gagggcggttttgacacggtgttggtcgatgccccttgttcggggagcggatcctggcgg
cgggacccacagggcaagtgggcgctcacccccgagcgtttgaccgaattgacggcccta
cagggggaaatccttgaccttgctgcgcgtcatgttttgccaaacggtcggctaatctac
gtgacctgttcaatgttggcacaggaaaatggggcgcaagtggcgggtttcctagcccgg
cacccggattggaccggcaccggaacacgtcagttcacaccagccgatggcggggatggg
tttttcttcgccgaattgatagctccttag
DBGET
integrated database retrieval system
