Flavobacteriaceae bacterium UJ101: UJ101_01174
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Entry
UJ101_01174 CDS
T04720
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
fbu
Flavobacteriaceae bacterium UJ101
Pathway
fbu02020
Two-component system
fbu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UJ101_01174
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UJ101_01174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbu03021
]
UJ101_01174
Transcription machinery [BR:
fbu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UJ101_01174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
SF3b1
Motif
Other DBs
NCBI-ProteinID:
APD06698
UniProt:
A0A1J0LL26
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All DBs
Position
complement(1329236..1330687)
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AA seq
483 aa
AA seq
DB search
MLKQDLYLKLNQKLSPQQIQLMKLVQLPTLAFEERIKQELEENPALEEGHDFTERDEFSN
QEDYQDSERIDASDINIDEYLSDDDMPSYKTYSNNYSADADDTTVPYAGGITLNEYLIGQ
LHTARMSDEDYLIADFLIGSIDGDGYIRRDLKSLSDDLIFTQNLVADEKKLEELLVGYIQ
KLDPVGVGARSLQECLLIQLEAKENTMELRLAKGIVENSFEEFTKKHYQKIMKHFEVDEE
LLKGAIKEIEKLNPKPGKSFSGNTKIVEQITPDFAITIVDGELDLKLNSGNAPELRLSGE
YRNLFEAYKEGDKKNEEQKKAVQFVKQKLDSAKWFIDAVKQRENTLMLAMGAIMRFQEEY
FLTGDEQKIRPMILKDIADEIKMDISTISRVANSKYVSTPYGTLLIKELFSESMTTTSGE
EVSTREIKKILQDAIKEESKKKPLTDEKLSELLKSKGYKVARRTVAKYREQLNIPVARLR
KKL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaagatttatatttaaagcttaaccaaaagctatctcctcaacagattcag
ttgatgaagctagtacaattacctactttagcttttgaagagcgtataaaacaagaacta
gaggaaaatccagctctagaagaaggacatgattttacagagcgagatgaattttctaat
caagaagattatcaagactctgaacgaattgatgcatctgatattaatattgatgaatat
ttgagtgatgatgatatgccttcttataaaacctattctaataattatagtgcagatgct
gatgatactacagtaccttatgcaggagggatcacattaaatgaatatttaatcggtcaa
ttgcatacagcaaggatgtctgatgaagattatttaattgctgattttttgatagggagt
attgatggagatggttacatacgtcgtgatttaaaatccctttcagatgatttgatattt
actcaaaatttagttgctgatgagaaaaaattagaagagcttttagtaggatatattcag
aagttagatcctgtaggtgtgggagcacgctcgttacaagaatgcttacttattcagtta
gaagctaaagaaaatacaatggagttgcgtttagctaaaggtattgtggaaaattctttt
gaagaatttactaaaaagcattaccaaaaaatcatgaagcattttgaagttgacgaagaa
ttgttgaaaggggctattaaagaaattgaaaaattaaatccaaagccaggaaaatcgttt
tctggaaatacaaaaatagttgagcaaatcacacctgattttgctattaccatcgtagat
ggtgaattagatttgaaattgaatagtggaaatgctcctgaattacgtctgtcaggtgaa
taccgaaatctttttgaagcctataaagaaggagataaaaaaaatgaagagcaaaaaaag
gcagtacaatttgttaaacagaaattagattcagccaaatggtttatcgatgctgtgaag
caacgtgaaaatactttaatgctagctatgggagccattatgcgatttcaagaagaatat
tttttaacgggtgacgagcaaaaaataagacccatgattttgaaagatattgcagatgaa
attaagatggacatttcaactatttcacgggtagcaaatagtaagtacgttagtacccct
tatggaacacttttaattaaagagcttttttcagaaagtatgaccactacaagtggagaa
gaggtttcaacacgtgaaatcaaaaagattttacaagatgctattaaagaagagagtaag
aaaaaacctttaacagatgaaaaattatctgaattattaaaatcaaaaggctacaaagta
gcccgtagaacggtagctaaataccgtgaacagttaaatattcctgttgctagattgaga
aaaaaattataa
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