Felis catus (domestic cat): 101086737
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Entry
101086737 CDS
T02385
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X3
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
fca
Felis catus (domestic cat)
Pathway
fca03082
ATP-dependent chromatin remodeling
fca04714
Thermogenesis
fca05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101086737 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101086737 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101086737 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fca03000
]
101086737 (ARID1A)
03021 Transcription machinery [BR:
fca03021
]
101086737 (ARID1A)
03036 Chromosome and associated proteins [BR:
fca03036
]
101086737 (ARID1A)
Transcription factors [BR:
fca03000
]
Eukaryotic type
Helix-turn-helix
ARID
101086737 (ARID1A)
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101086737 (ARID1A)
Chromosome and associated proteins [BR:
fca03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101086737 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101086737
NCBI-ProteinID:
XP_019692010
EnsemblRapid:
ENSFCTG00005027474
LinkDB
All DBs
Position
C1:19994939..20064037
Genome browser
AA seq
1943 aa
AA seq
DB search
MVLGLGVVQGTWSPVQNGLQFQRENKQKSGKKILSFNSEPSSPMDQMGKMRPQPYGGTNP
YSQQQGPSSGPQQGHGYPGQPYGSQTPQRYPMAMQGRAQSTMGGLSYAQQIPPYGQQGPS
GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLPSSQPPYSQ
QPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYP
QPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLP
DLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPV
GSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMP
QYSSPQPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPN
ANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVG
SGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGM
INPQGPPYPMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSS
STTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKE
IGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAA
ADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMS
RSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAP
GSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNM
GTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTM
YQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQP
SPQQDVYNQYGNTYPATAAAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMM
GGPIQASAEVTQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANH
EGPWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSP
SKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTM
KDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFR
RCLIEIFGILKEYEVGDPGQRTLLDPGRFSKASSPAPMEGEEEEDLLGPKLEEEEEEEVV
ENDEEMAFSSKDKAASESSEEKLVSKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLL
HWRIGGGDTTEHIQTHFESKTELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGP
PEKRITATMDDMLSTRSSTLSEEGAKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSK
DETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHP
ERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICL
PVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFS
RLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDS
LAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDIS
VSPLMNSLVSQVICDVLFLIGQS
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgggtctaggcgtagttcagggcacatggagccccgttcaaaatggattgcag
tttcagagagaaaataaacagaagtctggaaagaagatcctaagtttcaatagtgagcca
tccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaaccca
tactcgcaacaacagggaccttcatcaggaccgcagcaaggacatgggtacccagggcag
ccatatgggtcccagaccccacagcggtacccgatggccatgcagggccgggcgcagagt
accatgggcggcctctcttatgcacagcagattcctccttatggacaacaaggccccagt
gggtatggtcaacagggccagactccatattacaaccagcaaagtcctcacccccagcag
cagcagccaccctactcccagcagccaccatcccagaaccctcacgcccagccttcctat
cagcagcagccgcagtctcagccgccacagctcccgtcttctcagcctccctattcccag
cagccatcccagcctccacatcagcagtccccgactccatacccctcccagcaatccacg
acgcagcagcacccccagagccagcccccctactcacagccacaggcacagtctccctac
cagcagcagcaacctcagcagccagcctcctcgacgctctcccagcaggctgcgtaccct
cagccccagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccg
caggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctcc
agtaagggagggcaagaagatatgaacttgagtcttcagtcaagaccctcaagcttgcct
gatctgtctggttcaatagacgatctccccatggggacagaaggagctctgagccctgga
gtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcct
ttctctcctcatacttcccctcacctgcctggcatccgaggcccctccccgtcccctgtt
ggctctcccgccagtgttgcccagtctcgctcaggaccactctcgcctgctgcagtgcca
ggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttcc
atgaatcaatcgagcattgctcaagatcgaggttacatgcagaggaacccccagatgccc
cagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggtggacag
atgcacacaggcatgggctcctaccagcagaactccatggggagctatggtccccagggg
agtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttgcccaat
gctaactaccccagtgcaggcatggctggaagcatgaaccctatgggtgctggaggtcag
atgcatgggcaacctggcatcccaccttatggcacactccctccagggagaatgagtcat
gcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggttggg
tcagggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgcc
atgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcag
ggaggcatgatgggaacaggacctccctatgggcaagggattaatagtatggctggcatg
atcaaccctcagggacccccgtatcccatgggtggaaccatggccaacaattcagcaggg
atggcagccagcccagagatgatgggccttggggacgtcaagttaactccagccaccaaa
atgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttct
tctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagagg
aagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgacaaat
ctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggag
attggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctc
aatgtgggcacctcaagcagcgctgccagctccctgaaaaagcagtacatccagtgtctc
tatgcctttgagtgcaagattgaacggggggaagaccctcccccagacatcttcgcagct
gctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatctgggtct
atgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggaggagacctg
aagccaccaactccagcatccacaccacacagtcagatcccccccttgccaggcatgagc
aggagcaattcagttgggatccaggatgcctttcctgatggaagtgaccccacattccag
aagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatg
atggggcgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaagctcca
gggagtgatcccttcatgtcctcagggcagggccccaatggcggaatgggagacccctac
agccgagctgccggccctgggctgggaaatgtggcgatgggacctcgacagcactatccc
tatggaggtccttatgacagagtgaggacggagcctggaataggacccgagggaaacatg
ggcactggagccccacagccgaatctcatgccttccaacccagactcggggatgtattct
cctagccgctaccccccgcagcagcagcagcagcaacaacgacatgattcctatggcaat
cagttctccactcaaggcaccccttccggcagccccttccccagccagcagaccacaatg
tatcagcagcagcagcagaattacaagcggccgatggatggcacttacggccctcctgcc
aagcggcacgaaggggagatgtacagcgtgccgtacagcacggggcaggggcagccccaa
cagcagcagttgcccccagcccagccccagcctgccagccagcagcaagctgcccagcct
tcccctcagcaagatgtgtacaaccagtatggcaacacttaccccgccactgccgctgct
gctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggccga
gaccgtgtctctgcaccccccggctccaatgcccagcagaacatgccaccgcaaatgatg
ggcggccccatacaggcatcggctgaggttactcagcaaggcaccatgtggcaagggcgt
aatgacatgacctacaattacgccaacaggcagagcactggctctgccccccagggcccc
gcctatcatggtgtgaaccgaacagatgaaatgctgcacacggatcagagggccaaccat
gaaggcccgtggccttcccatggcacacgtcagcccccatatggtccctctgcccccgtg
ccccccatgacaaggccccctccatccaactaccagcccccgccaagcatgcagaatcac
attcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctcccct
agcaagtctccattcctgcactctgggatgaagatgcaaaaggcaggtcccccagtgcct
gcctcgcacatagcacctgcccctgtgcagccacccatgattcggcgggacatcaccttc
ccacctggctctgtggaagcaacacagcctgtgttgaagcagaggaggcggctcacaatg
aaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctgctg
gcagagagcacatgggcattagacaccattaacatcctgctgtatgacgacaacagcatc
atgaccttcaacctcagtcagctcccagggttgctggagctccttgtggaatatttccgg
cgttgcctcatcgagatctttggcattttaaaggagtatgaggtgggtgacccaggacag
agaacactactggaccctgggagattcagcaaggcgtctagtccagcccctatggagggg
gaggaggaggaagaccttctaggtcctaaactagaggaggaagaagaggaggaagtagtg
gaaaatgatgaggagatggccttttcgagcaaggacaaggcagcctcggagagtagtgag
gagaaactggttagcaagtttgacaagctcccggtaaagatcgtgcagaagaatgacccg
tttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctgctg
cactggcggattggtgggggggacaccactgagcatatccagacccactttgagagcaag
acggagctgctgcctacccggcctcatgtgccctgcccaccagtcacccggaaacacgtc
acggcggcagaggggacaccagggacaacagaacaggagggccccccacccgatggccct
ccagagaaacggatcacagccacaatggatgacatgttgtccacccggtctagcacgttg
agcgaggagggagctaagagtgcagaggccaccaaggagagcagcaagtttccatttggc
atcagcccggcacagagccaccggaacatcaagatcctagaggacgagccccacagtaaa
gatgagaccccactgtgtacccttctggactggcaggattccctcgccaagcgctgcgtc
tgtgtctccaacaccatccgaagcctgtcgttcgtgccaggcaacgactttgagatgtcc
aaacacccggggctgctgctgatcctgggcaagctgatccttctgcaccacaagcaccca
gagcggaagcaggcaccactgacttacgagaaggaggaggagcaggaccaaggggtgagc
tgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggtc
acactcgccaacatctcggggcagttggacctctccccataccctgagagcatttgcctg
cctgtcctggacggactcctacactgggcagtctgcccttccgccgaagcccaggacccc
ttctccaccctgggccccaacgccgtcctctccccgcagagactggtcttggaaaccctc
agcaaactcagcatccaggacaacaatgtggacctgatcctggccactccccccttcagc
cgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccggtg
tgccgggagatggccgtggtactgctggccaatctggcgcagggcgacagcctggcggcc
cgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggacagc
ctcgccgccacacagttccagcagagccaggccagcctgctccacatgcagaacccgccc
ttcgagccaactagcgtggacatgatgcggcgggctgcccgcgcgctgctggccctggcc
aaggtggacgagaaccactcggagttcacgctgtacgagtcgcggctgttggacatctcg
gtctcaccgttgatgaactcgttggtttcacaagtcatttgtgatgtactgtttttgatt
ggccagtcatga
DBGET
integrated database retrieval system
