Felis catus (domestic cat): 101094094
Help
Entry
101094094 CDS
T02385
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
fca
Felis catus (domestic cat)
Pathway
fca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101094094 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fca04990
]
101094094 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
fca04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
101094094 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101094094
NCBI-ProteinID:
XP_006930956
EnsemblRapid:
ENSFCTG00005012197
LinkDB
All DBs
Position
B1:complement(104684248..104857173)
Genome browser
AA seq
1262 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP
CADLTYPQVIKLMESITDSLQMLIKRPSSGVNETSISETENKNREHPTHERCVESTTLQI
RPATKNQHREFYVASIKSGVPLTEDQGSGPGFSESIKEETGLSYHVAPYMPDSQRGRLAE
EVILREKAEAGQPGPVVELQLSLSQERHKGTNVPVVALLGAEKSKSPDPDPYLQHDRIVH
INSVPTNEKGEPSLRSSKIIQISSGKELKVIQGNEAGDKGLPRVEVILDCLDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRLERDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRAKKYTLVSYGTGELERE
ADEEEEGDKEDNCEVAFLGTSESEVDEELLSDIDDSAQVVNFDWDSGLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQREEERMGGVPGREPDAAQTDSLRTMASYQRKE
EESVKVQSSVSRSYIEVSHGLGHGPQQNGFSGVSETAEAQRTVPMNRTAKPFPGSVSQPA
APFSPTRNMTSPIADFPAPPPYSAVTPPPEGFPRAVSSPTAGPAQPPPWPQPAPWSQPAF
YDSSERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVNPNPELLSLLQNSEGK
KGAGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGMAPSQPPAFPTSNPSQGTVVSSIKIAQPSYAPARPASALTLAGPFKGPQAAVASPNY
TPKPTAPAPAVNAAHAGAVGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQSSAPQASKTSKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLLQKSSIKVNSMPAMKQALPPRPVNAGSPTNAQ
ASSVYSVPAYSSQHPFFAEATSPVSASPVPVGIPTSPKQESASTSYFVAPRPKFSAKKSG
VTVQEIGRSLSLPGRPVPPTISTTSPWIYQPAYSYSSKPTDGLEKANKRLTPWEAAAKSP
LGLVDDAFKPRNIQESIVANVVSAARRKVLPGPSDDWNKRLSCVPQAQKASMGSFARQEY
NVASLPDNNMPTNSQYGSQVSYAYYRQPSRNDSEIMSMETRSDYCLSIADYNYNPHPRGW
RR
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttccatgaccggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgctaagatccgaagccagagc
aaagcctctgggtctgggctctgtgagggggatgaagtggtttctatcaatggcaaccct
tgtgcagaccttacctacccccaggtcatcaagctcatggagagcataacagactctctc
caaatgctcatcaaaagaccatccagtggagtaaatgagacttccatttctgaaactgaa
aacaaaaaccgtgagcatcccacccatgagcggtgcgtggaaagtaccactctgcagatt
cgaccagccacaaagaaccagcacagagagttctatgttgcctcgatcaagagtggagtt
cctctaactgaggaccaagggagtggtcctggtttttctgagagcataaaagaagaaaca
ggcctgagctaccatgtggctccctacatgcccgactcccaaagaggacgcttagcagag
gaggttatcttaagggagaaggcagaagctgggcagccaggccctgtggttgagttacaa
ctgtccctttcacaagagagacacaagggcacaaatgtccccgtggtggctctcctggga
gctgaaaaatctaagtctcctgacccagatccttatttacaacatgacaggattgtccac
ataaattcggtccccacgaatgagaaaggggagccttctctgaggtccagcaagataatc
cagatctccagtggcaaagagttaaaagtgatccagggaaatgaagcaggagacaagggg
ctgccccgagtggaagtgatactcgactgcttggacaggcagaagacggaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgcagtctcatcagaaggcacagagcagggagaagatccacgc
ttggaaagggatcacagcagacctcacaagcacagagcgcgtcacgcacggctcaggaga
agtgaaagcctatcagaaaagcaggtgaaagaagcaaaatctaaatgcaaaagcattgcc
ctccttctaaccgacgcccccaaccccaactccaagggggtgttgatgtttaagaagcgt
cgtaggcgggccaagaaatacaccctagtcagctacggcaccggtgagcttgagcgagag
gcggacgaggaggaagaaggagacaaagaagacaactgtgaagtagcatttctgggcacg
agtgaatcagaagtggatgaagagttattgtctgacattgacgacagtgcacaagttgtg
aactttgactgggattctggactagtggacatcgagaagaaactgaacagaggggacaag
atggagatgctgccagacaccacgggcaagggtgccctcatgtttgccaagaggagggag
cgaatggatcaaatcacggcccaaagagaggaggagaggatgggaggagtgccaggcaga
gagccagatgctgcccagacagacagcctgagaaccatggcttcttaccagaggaaggaa
gaagagtctgtgaaagtgcagagctcagtgagcagaagctacatcgaggttagccatggt
cttggccatgggccccaacagaatggcttcagtggggtgtccgaaacagcagaggcccag
aggacggtccctatgaacagaacagccaaacccttcccggggtctgtgagccagcctgca
gcccccttctccccaacccggaatatgacgagtcccatcgcggacttccctgcgcctcca
ccttattctgcggtcacacctccacctgagggcttccccagagcagtgtcgagtcccaca
gctggcccagcgcagcctcctccgtggccccagcctgccccgtggtcccagccagccttt
tacgattcatctgagcggatagcttcccgggatgaaaggatcgctgtgcctgcaaaaaga
accggaatattgcaggaggccaaaaggaggagcacgacaaaacccatgttcacttttaaa
gagcccaaggtgaacccgaatcctgaactcttgtcacttcttcaaaattcagaaggcaaa
aagggagctggagctggaggcgattccggacccgaagaagactacctcagtttaggagca
gaggcttgtaatttcatgcagagctcctctgccaaacaaaagactccgcctcctgtcgct
ccgaaacctgcagtcaagtcctcgtcctcccaaccagtaactccagtttctccggtctgg
tccccaggaatggctccaagccaacctcctgccttccccacgtccaacccatcgcagggc
accgttgtctcctccatcaaaatagcccagccttcctacgctcctgcccggcccgcgagt
gctctgaccctggctggtcccttcaaaggaccacaggcagcagtggccagtccgaactac
acaccgaagccaacggctcccgcaccggcagtaaacgccgctcatgctggtgcagtggga
ccatccaatgagcttccgggaatgagcgggaaaggagcccagctctttgctaaaaggcag
tcgaggatggaaaagtacgtggtggattcagacaccgtgcaggcccatgcggctcgcgcc
cagtctcccactccctctctaccggccggatggaagtactcctccaacgtccgagcacct
cctcctgtggcctacaatcctatccactcgccctcctaccctctggccgctgtcaagtct
cagtcatcagccccacaggcctctaagacaagcaagaaaaagggcaaaaaacccctcaat
gctttggacgtcatgaagcaccaaccataccagctaaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcctccaaaagtcatccatcaaggtcaattcgatgcca
gccatgaagcaagctcttcctccccggccagtgaatgctggctcgcccactaatgcgcag
gcctcatctgtgtactcggtcccagcatatagctctcagcatcccttctttgcagaggcc
acctcgcccgtcagtgcgtcgccagtgcccgtgggcattcccacctctccaaagcaagaa
tcagcctctacatcttattttgtggcaccaaggccgaagttctcagccaagaaaagtggt
gtcacagttcaggagattggacgctccctttctcttcctggaagaccagtcccacccacc
atctccacaacatctccttggatataccagcctgcttatagctactctagcaaaccaact
gatgggctagagaaagcaaacaagagactaactccttgggaagcagcagcaaagtctcct
cttggtctagtggatgatgcctttaagcccagaaacatccaagaatccattgtggcaaat
gtggtctcagcagctcggaggaaggtgctcccagggccctcagatgattggaataagaga
ctgtcctgtgttcctcaagcccagaaagccagtatgggctcattcgcaaggcaagagtat
aatgttgcatccttacctgataataatatgcccaccaactcccaatatggttcacaggtc
tcatatgcgtattataggcagccttccagaaatgattctgaaataatgtccatggaaact
aggtcagattactgtctttcaatagctgattacaactacaacccacacccaaggggatgg
agacgctaa
DBGET
integrated database retrieval system