Flavobacterium channae: LOS89_08340
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Entry
LOS89_08340 CDS
T08502
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fcb
Flavobacterium channae
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcb03009
]
LOS89_08340
Enzymes [BR:
fcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LOS89_08340
Ribosome biogenesis [BR:
fcb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOS89_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF4159
Motif
Other DBs
NCBI-ProteinID:
UGS22786
LinkDB
All DBs
Position
complement(1805802..1806839)
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AA seq
345 aa
AA seq
DB search
MADYNVGNELEDELYEHHRFEASKGQSALRVDKFLMNMIENTTRNKIQQAAEQGSILVND
VPVKSNYKVKAGDVVRLVLAHPTYEQLLTPENIPLDIVYEDDQLLVINKPAGMVVHPGHG
NYSGTLVNALAYHFENLPMNSSERPGLVHRIDKDTTGLLVVAKTELAMAYLTKQFAEKTS
EREYIALVWGNIEEDEGTIEGNIGRHDSNRMQMAVHEDEEKGKPAVTHYKVLERFGYVTL
VSCQLETGRTHQIRVHMKHIGHTLFNDERYGGNAILKGTTFTKYKQFVDNCFKVLPRQAL
HAKTLGFEHPITKEFLRFDSEIPQDLQECIEKWRVYSKAQTYTEE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggattataatgtaggaaatgaactcgaagacgagttatacgaacatcatcgtttt
gaagcaagtaaagggcaatcagccttacgagtggataaatttttgatgaacatgattgaa
aataccacacgaaataagattcaacaagcagcagagcaaggttcgattttagttaatgat
gttccagttaaatcgaattacaaagtaaaagcaggagatgtagtgcgattggttttagcg
catcctacttatgagcagttgcttacacctgaaaatattcctttagatattgtttatgaa
gacgatcaattgttggttataaataaaccagcaggaatggttgtgcatcccggacatggg
aattattcaggaactttggtaaatgccttggcttatcattttgagaatttaccaatgaac
agttcagaacgacctggattggttcacagaattgataaagatacaactggattgttagtt
gttgcgaaaacagaattagcaatggcttatttgactaaacaatttgcagaaaaaacttct
gaacgtgaatatattgctttggtttggggaaatatcgaagaagatgaaggtacgattgaa
ggaaacattggaagacacgattcaaatcgtatgcaaatggcagttcatgaagatgaagaa
aaaggaaaaccagctgtaacgcactataaagttttagaacgatttggttatgttacttta
gtatcttgtcaattagaaactggaagaacacatcagattcgtgtacatatgaaacatatt
ggtcacactctttttaacgatgaacgatatggtggaaatgctattttaaaaggaactact
tttaccaaatacaagcaatttgtagacaattgttttaaagtgttgccaagacaagcgtta
catgcaaaaacattaggttttgaacatcctataacaaaggaatttttgcgattcgattct
gaaattcctcaagatttacaggaatgtatcgagaaatggagagtgtattcaaaagcacaa
acatatacggaagaataa
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