Flavobacterium cyclinae: LOS86_05245
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Entry
LOS86_05245 CDS
T08416
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc00470
D-Amino acid metabolism
fcc00550
Peptidoglycan biosynthesis
fcc01100
Metabolic pathways
fcc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOS86_05245
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOS86_05245
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LOS86_05245
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcc01011
]
LOS86_05245
Enzymes [BR:
fcc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LOS86_05245
Peptidoglycan biosynthesis and degradation proteins [BR:
fcc01011
]
Precursor biosynthesis
Amino acid ligase
LOS86_05245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
UGS22027
LinkDB
All DBs
Position
complement(1099667..1100641)
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AA seq
324 aa
AA seq
DB search
MKNVAIIMGGYSSEYKISLTSGNVVYNNINRAKFNPYRIHIFKEKWVYVDENDAEFQVDK
NDFSVTINGNKINFDVVFNAIHGTPGEDGLMQAYFELLNIPQTSCDYYQAALTFNKRDML
SVLKPYGIKTAESYYLNLGDEINVDKILAKVGLPCFVKPNKSGSSFGISKVKTKEEFLPA
IENAYKEDDEIIIESFLDGTEVSVGVINYKGNVTVLPITEIVSENDFFDYEAKYLGKSKE
ITPARISEELKVKIETVAKRAYEVLKMKGFSRSEFIIVNNEPHMLEMNTIPGLTTESILP
QQAREAGISLPELFENAIELALNK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgttgccattatcatgggaggttactctagcgagtacaaaatttcgttaacc
agcggaaatgttgtgtataacaatattaatcgtgctaaatttaatccgtatcgaattcat
atttttaaagaaaaatgggtttatgtggatgaaaatgacgctgaatttcaagttgataaa
aacgatttttcggtaactataaatggtaacaaaattaattttgatgttgtttttaatgcc
attcacggaacacctggtgaagatgggttaatgcaagcttattttgaattattgaatatt
cctcaaacgtcatgtgattattaccaagccgcgttaacattcaacaaacgcgatatgctt
tcggttttaaaaccttacggaataaaaactgctgaatcgtattatttgaatttgggcgac
gaaattaatgttgacaaaattctagcgaaagtaggattaccctgttttgtaaaaccaaat
aaatcaggttctagtttcggaatttcgaaagtaaaaacgaaagaagaatttctaccagct
attgaaaacgcttataaagaagatgacgaaatcattatagaaagtttccttgacggaact
gaagtttctgttggagtaatcaattataagggaaatgttacggttttacctattaccgaa
attgtatcagaaaacgacttttttgattacgaagcaaaatatttgggaaaatctaaagaa
attacgccagctcgaatttcggaagaactaaaagtaaaaatagaaacagttgctaaaaga
gcctatgaagtcttgaaaatgaaaggtttttcgagaagtgaatttattatcgttaacaac
gaacctcacatgttagaaatgaacaccattccaggtttaactactgaaagtattttacca
caacaagcacgcgaagctggaatttcgttgcctgaattgtttgaaaacgctattgaattg
gctttaaataaataa
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