Folsomia candida: 110843467
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Entry
110843467 CDS
T05043
Name
(RefSeq) vacuolar protein sorting-associated protein 13-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcd04131
]
110843467
Membrane trafficking [BR:
fcd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110843467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_ext_chorein
VPS13_mid_rpt
VPS13_DH-like
VPS13_VAB
Chorein_N
VPS13_C
ATG2-VPS13_C
Motif
Other DBs
NCBI-GeneID:
110843467
NCBI-ProteinID:
XP_021945124
LinkDB
All DBs
Position
Unknown
AA seq
3304 aa
AA seq
DB search
MVFESIVVDILNRLLGDYFENLDTSQLKLGIWGGDVVLRELLLKASAMDDLGLPFKVVVG
KVGTLRMKIPWQSLYTAPVELNLQNLLLLVTPSYSVKYNEEAEEKALQAAKEKELTRLDE
IRAREREKQQQEGQTPAQEDSFTEKLITQIIKNVQIRIDCIHIRYEDDVTKPASPFGFGI
ILKNLHIETTDTDWRPVVITEIVETVNKMATLEGLAVYWNSQTQLLQRMGQKVQMMEALR
DIVLQDTPDLTYILGPISSTAKVLLTPNPERCVEIFSKPKFFVDLIMEELGLGMTNLQFQ
DIMELIESIDFMTRAQYYRKYRPAVNIHRGHFKEWWMFAYKCIVEEEVRRKRQNWDWLHI
KRHRNLCRIYADAYYKKLTSRKLKSDTTQSLQACEKVLDVFNITLVRKQVEVKVEREGKK
RAEEESKRQSTGWFGGWTTWLGGDSAPKANENTMGDIVQKFEEALTPEEKSKLYAAIDYS
ENALPLDYPDTYLEYQLKFLLSKLTLTVRDVLGRETRGHKILKLTVDSVATKIATRPVKN
GMQVEVLMASFEAEGLKGKHDTVPVKMITSKTKSTTNLVEVYFENNPLNSQANQKIRIQA
QPIEILYHGKTIVHLVRCFALPPEMQLSKLQAAAVSTLNEWKEQSAAGLQHLAETRGEID
LQLDLIAPYILIPRGGVLNPNSSCLLIDLGELKIQSKPRIKKSVSADKVMSKSHQHDADY
MEAMKKVAYDTLLIELRDFQVVLALPGENIDVSKGKLGVGPAVAMPQTLIKSSQLILQLD
QSLVPDDPRFAKLQLEGSLPMLNLNLSDRRLTELVKLLVTLPFPKADVPDSTTSPPVLST
ISEDPTVSQSYAISKITYDTTKRKDADHPQLVEFIELLLKFTLDSIRIQISRTNNSSQNV
PFVDFELKQIQAKLTNKTFSSAVDVAVGGLTLCALQNKTIDIDGLLYLLKTPMSEGIEKH
LFKMHMFSIMPDCPIAFVGKVKQLIKVEVSSLDVILHSEALQALISFGAEIQKAVEEAAA
ESKGGSGQNNLDNLSVSSVSSVDSGMITKIRSRRVSKQFQKLENTRKAVAKKHINSGDVL
LQIDAKMESLTVQISTEKKNLIKAILSELDLSMVQKSEHTIMLMELKDLRVRNLDRTSIY
RDMMRVDSDKVVAIKVVMHEDATKGKQFYNMDKHDMSVKVETGSPKIFYVSHQLDELLAF
IDNFSAAKDAVIDASSAAASAAKENVEQAYSAATRILLDIELNAPIVFIPRNERSDHAIL
ANLGRLSIKNKFVKQEVKHLSATAILDKMDITLTNMKLSRIFFNKGTQDAQSEVSMLDPV
TLVLSINRNLSTDWYHGCADISLKGTLQNAFLRASNEDYDLIMSILFENILYVQEPSPAT
GSRAPVAAAGSKSPGTPKPTGGSTRRRKTSVTVSKEHISETSVQTVLSARTIDNAVYTKL
EVSIDIPQMRVIMYQKGAIQLETSQGVVGRDDATAFADFAIRSIKMDMKSFNNENISCPI
TVGEISLKDVRPGDRAVTNLIKKKADPDDTDASDSCVAKFCFKTDKANKKGSTMTLETTS
LTIILCLDYLLQIVDFFSRSDTAMEYPKPDLTTKVEKFGTTSDPVPVREVTPDLPKVTIG
VDEELEAEPFCAFYNFSETEIILVESMESVQSNALLLHCEVALKQQELNGRSNMMGTIGN
LNLSTCNYDVDDNHQAIAEVISPMSITVVMNNSEAVGTLIDVNISDIFIRMTAGTLELLL
KIVSTIGSSADAASAKTDGKDYSDLWDIKRNDEMNFWFLNSDASVEVGLEALQVQEDKVR
LFNVAEELKVSERLVMESGCIVFTFETGVGNNTMPMLLIETDIDLQMFDWSTNMTVAGRC
KLEAAYYNATFGLWEYLVEPVESRHHGRIAHQPWELLFEYSSRINPNAITTDEESATNSY
VSIALESSSILELTVTKTALEVVDILKDDFQAATKKLVSEKAISTAAYSIVNDTGSDLKI
FIKEKTRSPCFVLVRGGVDYEEVLLKHGTSVNLGLIESSDMTKHHSSVLREQEGKEERLL
SIEIEEYDFKREIPVNRATKRYYSLKHKDRHGYFGLICDIWVKDCSKIVTLRGVVQIMND
LQVDVDVYYKEDNGRVAKFAGTATAGQKCNLSIPCTFTKTGDLFFAPKGFNISNEPFSWL
QALQELHKVSQVVCKSKSQDTSHFFIKVIGEAKQALHESTNRKNLASQCCYIYLEPPLLL
NNLLPIPIGYYSSNDLIMADRGSSICVTNLNVDLEGSCSLKLKIPEYNKMSWICNVVLDV
TTPEISQWTFISESDNKITIGIHRETDDNEVTLHIYTPYWMINRTGLDLVYKGDDKQSHQ
TLHSKVQEEPVIFSFPGKAFFSKKAAFVKVTHPKLPGPGSDWSEKFSIDVAGSGGSVTCK
SPVHQFQLGIEIQLSSWGLTKYVIFTPRFYLVNQCSFQVSVKEEDKPDHIVDVSPNACVP
YWPESTLPHLIAVIEADGSKNETKPFKYDIVRHTLLQLRGKYGGIHVDIHYSEAKTVITF
TEFIPGQAPVLLVNGTTECPLEITEEGLEDVFILLPRMCQMFTWKDPIGPRVLRWSAVAA
EKKPQGTDKLFGDGCGTFFVEGRTYYWISFLDGLQRVLLFTADMELTTYLQAARENEVAT
AEYIIMLHGIGISLVSLKELLYMRIASSEISWEASKPAKKKRFKPLAYDVSKSIEMAYQN
YLNQKAIQASVKTNICLDSGFEVDFSTMMISKPHHKNIRRVFQTGIWLHYKTLPNSSQFH
AKINRLQIDNQLPDTIFRVVFAPVPPPKSVSTTDVPKPFAEVSIMQRINAHSYVQQFKYF
KILVQEFHIKLDISFVNALVDMFSGTSASRQESMLMKFNAEYSEACLNMKDVLARQIVSQ
GQKHFYDFLHFSPLKMHISFSMGGSAQLSNHFLNLVLASVGVTLTEIQDVVFKLSCMELQ
HSFLSGDQLYNEVYSHYTSQAIKQLYVLVLGLDVLGNPYGLAMGVASGVEAFFYEPLQGA
IQGPGEFAEGLALGVKKLLGSTVGGAAGAFSKITGTLGKGIAALTMDDEYQKKRRENMHH
RGDAAEGLARSGKGLVMGFVEGLTGFVSKPIRGAKEDGVGGFFKGVGKGTIGLVARPAAG
VVDFASGSFDAVKKCASTNVEVHRMRPPRCIPPDSVLQPYVKHEAEGVQLLVDIEKGRYS
RTDSYIAHALINPHGIYVVLLTNKRLMYLKRDEMFGGWGVEWTYIWEDFSHPPDLVERGL
LFTLKTAPRKKLKVFGSAGSREIIIPIYSAEVCTWLLSKIEEAMKTETGMVFTDGIEATE
LSFA
NT seq
9915 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaaagcattgtcgttgatattttgaatcgccttttgggcgactattttgag
aacttggatacgtcacaattaaagcttggaatatggggcggggacgtagtactgagggag
ttacttctgaaagcctctgccatggacgaccttgggctccctttcaaagtagtagttgga
aaagtcggaacacttcgaatgaaaattccatggcagagtttatatactgcccctgtggaa
ctgaacttgcagaacttactccttctggtcacgccgtcttattctgtcaaatataatgag
gaggctgaagaaaaggccttacaagctgccaaagaaaaagagttaaccaggctggatgag
atacgagctcgtgaaagggaaaaacagcaacaagaaggtcaaaccccagcccaagaagac
agctttacagagaagctgataacacagattattaaaaatgttcaaatccgaattgattgc
atccatattagatatgaagatgacgtgacgaaacctgctagcccttttggatttggaatc
atattaaaaaatcttcacattgaaacaactgatacggattggaggcctgttgtaattaca
gagattgtggaaactgttaacaagatggcaactttagaaggtcttgctgtttattggaac
tcacaaactcaacttctccagcgaatgggtcaaaaagtgcagatgatggaagccttaaga
gacatcgtactccaagatactcctgacctcacatatattttgggaccaatttcttccacc
gctaaagtattgcttacgccgaacccagaaagatgtgtggaaatattttcgaaaccaaaa
ttttttgttgatttaattatggaggaattgggcttaggaatgactaatttacagtttcaa
gatatcatggagcttatcgaatccattgattttatgactagggcacagtactaccggaaa
tacaggcctgctgttaacattcatagaggacattttaaagaatggtggatgtttgcctac
aagtgtattgttgaagaagaggtccgtcgaaagcgacagaattgggattggctccacata
aaaagacatagaaatctatgtcggatttatgcagatgcatattataaaaaattgacaagt
cgcaagttaaagtctgacacaactcaaagtttgcaagcttgtgaaaaggtcctggacgtg
tttaacattacgctcgtgaggaagcaagtcgaggtcaaagttgaacgcgaaggaaagaaa
cgggctgaggaagaaagcaagaggcaaagcaccgggtggtttggaggttggacgacgtgg
ttggggggagactctgctccgaaggcaaatgaaaatacaatgggtgacattgtccaaaaa
tttgaagaagccctcactccagaagaaaaatccaaactttatgcagctattgattattct
gaaaatgcgttacctttggactatcctgatacatatcttgaatatcagctcaaatttctt
ctcagcaaactgacattgactgtgcgagatgttttgggtcgggaaacacgaggccataaa
attttaaagctaactgtggacagcgttgcaacaaagatagccactcgtccagtcaaaaat
ggaatgcaagttgaagttcttatggcgagttttgaagcggaaggcctgaagggaaaacat
gacactgtgcctgttaagatgattacttccaaaaccaagtctactacgaaccttgttgaa
gtttactttgaaaataatccattaaattctcaagcaaatcaaaagattcgaattcaagca
caacctatagagattctctatcatgggaagacgatagttcatcttgtacggtgctttgct
ctaccaccggaaatgcagcttagcaaactacaagccgcagcagtatcaactttaaacgaa
tggaaggaacaatctgccgctgggctgcagcatttagcagaaacacgtggtgaaattgat
ttgcaactggatctcattgcaccatatattttaattccacgcggtggagttctcaatccg
aattcaagttgcctcttgatagatttgggagaattaaaaatacaaagcaaacctagaatt
aaaaaatcagtctctgcggacaaggtgatgtccaaatcacatcaacacgatgcggattat
atggaggccatgaaaaaggtggcgtatgacacgctactaattgagcttcgtgactttcaa
gtggtactagcactaccaggtgaaaatatagacgtatcgaaaggcaaacttggtgttggg
ccagcagtggcaatgccacaaaccctaataaaatctagtcaactgattctacaactagac
caatcgctagtacctgacgatccgcgattcgctaaacttcaacttgaagggagtttaccc
atgttgaatctgaatttgtctgatcgtcgcttaacagaacttgtgaaactcctagtcact
cttccatttcctaaagctgatgtacctgattcaactacatccccaccagtcctcagcacg
atttctgaagacccaactgtgtcacagtcatatgcaatttctaaaataacatacgacacg
acaaagcgcaaagatgcagaccatccacaactggtggaatttattgaactgctattgaaa
ttcaccctagattcaatcagaattcaaatatcgaggacaaacaacagtagccaaaatgtg
ccttttgttgatttcgaattaaaacaaattcaagccaagctcacaaataaaacattcagc
agtgctgtggacgtggctgttggaggattgacattatgtgccttgcagaataagactatt
gatattgacggactactgtaccttcttaaaactccgatgagtgaaggaatagaaaaacat
ttgttcaaaatgcacatgttttccatcatgcctgactgtccgattgcctttgtggggaaa
gtgaagcaactaataaaagtagaagtttcttcgctggacgtaattttgcatagtgaagcg
ttgcaagctttaatatcatttggtgcagaaattcagaaagccgtagaggaagcagcagca
gaatcaaaaggaggaagtggacaaaacaatttggataatttatcagtgtcctcagtttct
tcagttgattctgggatgattacaaagatcagaagtcgcagagttagcaaacaatttcaa
aaactggaaaacactagaaaagcagttgccaaaaaacatataaattccggtgatgtgctt
cttcaaattgatgccaaaatggaatcactaactgttcagatatcgacagaaaagaagaat
ttaattaaagctatcttgagtgaacttgacttgtcaatggttcaaaaatctgagcacaca
attatgctaatggaacttaaggatctcagagtcagaaacctagatcgtacatcgatttat
cgtgacatgatgcgagtagattctgataaagttgtagcaatcaaagtcgttatgcatgaa
gatgcaacaaaaggcaagcagttttataacatggacaaacatgacatgtctgtcaaagtg
gaaactggaagtccaaaaatattctacgttagtcatcaactggatgaacttttggcattt
attgacaatttctcggcagctaaggatgctgtgattgatgcttcctctgcagcagcgtca
gcagctaaagaaaatgtggaacaggcatattctgccgccacacgaattttattggatatt
gaattaaatgctccaatcgtatttatccctcggaatgagcgcagtgatcatgctattctt
gctaatttgggacgactatccattaaaaacaagtttgttaagcaagaagtgaaacatttg
tccgctacagcaatattggacaaaatggatataaccctgacaaacatgaaattatcacgg
atatttttcaacaagggaacccaagacgcacaatcagaagtttcaatgttagatccagtg
actcttgttttatcaatcaatcgaaatctgagtacagattggtaccatgggtgcgctgac
attagtcttaaaggaactttgcaaaatgcgtttctgagggcaagcaatgaagactatgat
ctaattatgagcatcctctttgaaaacatactctatgtacaagaaccatctccagcaaca
gggagcagagctcctgtcgctgctgctggttcaaaatctccagggacgccaaagccaacc
ggcggaagtacacgaagaagaaagacatccgtcactgtatcaaaagaacatattagcgaa
acgagtgttcaaaccgttctgtccgcaaggacaattgataacgctgtctacactaaacta
gaagttagtatagatattcctcaaatgcgtgtcatcatgtatcagaaaggtgccattcaa
ctggagacatcacaaggtgtagttggtcgtgacgacgctactgcatttgctgattttgca
atcaggagtatcaagatggatatgaaatcattcaataacgaaaacatttcatgtccaatt
accgttggagaaatttctttgaaggacgtccgtcctggagatagggcagttacaaacttg
attaagaagaaagctgaccctgacgatacagacgcatccgattcatgtgttgctaaattc
tgtttcaaaaccgataaagccaataaaaaaggatcaacaatgactttggaaactacgagt
ttaaccataattttgtgcttggactatttattgcaaattgtggatttcttttcaagatct
gatactgccatggagtatccaaaacctgaccttactaccaaagtagaaaagtttggaaca
acgagtgatccagttccagtgcgagaagttactccagatcttccaaaagtaactatagga
gttgacgaagaacttgaagcggaaccgttttgtgctttctataatttttcagaaaccgag
attattttggtggaatcaatggaatcagtgcaaagcaacgccttgctcttacattgcgaa
gtagctttgaagcaacaggaactcaatggtcgctcgaacatgatgggtacaattggaaat
ttgaatttgagtacttgcaattacgatgtagacgacaatcaccaagcaattgctgaagtt
attagtcccatgtctataacagtagttatgaacaactctgaagctgttgggacgctgata
gatgtcaatatttctgacatttttatccgcatgactgctgggactttggagctcctcttg
aaaattgtttccacaattggcagttccgcagatgctgcatctgctaaaactgacggaaaa
gattactctgatttgtgggatataaaaaggaatgacgaaatgaacttttggtttttaaac
tctgacgcttccgtagaagttggattagaagccctgcaagtacaagaagataaagttcga
ctgttcaacgttgccgaagaactgaaagttagtgaaagattagtaatggaatctgggtgt
attgtatttacttttgaaactggtgtgggaaacaatacaatgccaatgttactaattgaa
acagacatagatcttcaaatgttcgactggtcaactaacatgactgttgctggacgttgc
aaattggaagcagcttattacaatgcgacatttgggctctgggaatacttggtggaacct
gttgaatcaagacatcatggacgaattgctcaccagccatgggaattactatttgaatac
tcttcacgaataaatcctaacgctattacaacagatgaagagtcagccaccaattcgtac
gtgtctatcgccttggaatccagcagtatattagagttgactgtaactaaaacagctcta
gaagttgtggatattttaaaggacgattttcaagcagctactaaaaaactagtgtccgaa
aaagcaatatctacagctgcttactcaattgtaaacgacacgggatctgatctgaaaatc
tttatcaaagaaaaaactcgttccccatgtttcgtcttggttcgagggggagtagattac
gaagaagtattactgaaacatggaacatcagtgaatttgggtttgattgagtcatctgat
atgaccaaacatcattcatccgttcttcgggagcaagaggggaaagaagaaagattatta
tcaattgaaattgaggagtatgattttaaacgagaaatccccgtaaatcgagccacaaag
cggtattactcattgaagcacaaggacagacatgggtattttggactcatttgcgatatt
tgggtgaaagattgttccaagattgtaactctaagaggtgttgtccaaataatgaacgat
ctccaagttgatgttgacgtgtattacaaagaggataatggacgggtagcgaaatttgcc
ggcacagccactgcaggacaaaaatgcaacctctcaattccatgcactttcactaaaact
ggggatttattttttgcaccgaaaggattcaatatttcaaatgaaccttttagctggctt
caagcactccaagagttgcacaaagtttcccaagttgtatgcaagtcaaagagtcaagac
acgtcccatttcttcatcaaagttatcggtgaagcaaaacaagccctgcacgagtcaacc
aaccgcaaaaacctagcaagtcaatgctgttatatttacttggaacctcctctattgtta
aacaacttgctgcctattcccattggatactatagctcaaatgatttaattatggctgac
cgtggtagttcaatatgtgtaacaaatctaaatgtggacttggaaggcagttgcagtctt
aaattaaagattccagagtataacaaaatgtcatggatctgcaatgttgttttggacgtt
acaacacctgaaatctcacagtggacatttatatctgaatctgacaacaaaatcacaatt
gggattcatagagagacggatgataacgaagtcactttgcacatttacactccttactgg
atgataaataggactggtttagacttggtgtataaaggggacgacaagcaatctcatcaa
actcttcactcaaaagtgcaagaagagcccgtaattttttccttcccaggaaaggccttc
ttctccaaaaaggctgcgtttgtcaaagtaactcatccaaaactgccgggacctgggtca
gattggtcggaaaagttctcaatcgacgttgcaggaagtggtggctcagtgacttgtaaa
tcgccagtacatcaattccaacttggtattgaaattcagttgagctcctggggcttgacc
aagtacgtcatctttactccaagattttacttggtgaaccaatgctccttccaagtttct
gtgaaagaagaagacaagccagatcatatcgtggacgtttcaccaaatgcatgcgtaccg
tactggccggaaagcactcttcctcatctaattgctgtaatagaagcagacggttccaag
aatgaaacaaaacctttcaaatatgatattgttcgtcacacactattgcaattgagagga
aaatatggcggtattcatgttgacatccattactctgaagcaaagaccgtcatcaccttt
acagaatttattccaggacaagcaccagtattgttggtaaatggaacaaccgagtgtcca
ctggaaattaccgaggagggcttagaagacgtattcatactcttgcctcgcatgtgccaa
atgtttacgtggaaagatcccatcggcccaagagttcttcgttggtcagccgttgctgca
gaaaagaagcctcaaggaactgataagttatttggcgacggttgcggaacgtttttcgta
gaggggaggacgtactattggatttctttcctggatgggcttcagagggtgctattattt
actgcagatatggaattaactacttacttgcaagctgcccgtgaaaatgaagtagcaact
gcagaatatataatcatgttgcacggtataggaatctccttggtctccttaaaggaacta
ctgtacatgagaattgcaagctcggaaatatcttgggaagcaagcaaacctgcaaaaaag
aagcgtttcaagccactagcttacgatgtcagtaaatctattgagatggcgtatcaaaat
tatctgaaccaaaaagccatacaagccagtgtgaaaacaaacatttgcctagattccggt
ttcgaggtcgacttttcaacaatgatgattagcaagccacaccataaaaatattcgccgt
gttttccaaactggtatttggctgcattataaaacacttccaaattctagtcaattccac
gccaaaatcaaccgacttcaaatcgacaatcaactaccagatacaattttcagagttgtc
tttgctcctgtgccaccaccaaaaagtgtttccactactgatgtacccaaaccattcgca
gaagttagcatcatgcaacgaattaacgcacacagctatgttcagcaattcaaatatttc
aaaattttagtccaagaattccatatcaaattagatatatcattcgtgaatgcacttgtg
gatatgtttagtggaacatctgcatccagacaagagagcatgttgatgaaattcaatgct
gagtacagcgaagcttgtctaaacatgaaagatgtacttgctcgccaaattgtttcacaa
ggtcagaaacatttttatgacttcttgcatttttctccactaaagatgcacatcagtttc
tccatgggtggatcagctcaattgtcgaatcactttctcaatttggtgcttgcgagtgtt
ggtgtaactctgacagaaatacaggatgtcgtgtttaaactatcgtgcatggaactgcaa
cattcattcctgtctggagaccagttatacaatgaagtctactcccactacacgtctcaa
gctatcaaacagttgtacgtccttgtattgggattagatgtactgggcaatccatacgga
ctagcaatgggggtggccagcggtgtagaggccttcttctacgaacctcttcagggagca
atccagggacctggagaattcgctgaaggcttggcattgggagtcaaaaaactacttggg
agcactgtgggaggagcagcaggtgcattttccaaaatcaccggaacactcggcaaaggt
attgctgctttaactatggacgatgagtaccaaaaaaagcgcagagaaaacatgcatcac
aggggagatgcggcggaaggtctggctagatctggtaaagggcttgttatgggctttgtg
gaaggcttgactggatttgtcagtaaaccaatacgtggagcgaaggaagatggtgtagga
ggattctttaaaggagtaggaaaaggaactattggattagtagcgcgacctgctgcaggt
gttgtcgattttgcgagtggttcattcgatgctgttaaaaaatgtgcctctacaaatgtc
gaagttcacagaatgcgaccccctcgatgcatccctccagactctgttctacagccatat
gttaaacatgaagctgagggagttcaactattggtggatattgagaaaggacgctattcc
cgaacggactcatatattgctcatgctctgataaatcctcacggaatatacgtggtgctt
cttaccaataaaagattgatgtacttgaaacgagatgagatgtttggtggatggggggtg
gaatggacttacatttgggaagatttttcccatcccccagatctagttgaaagaggacta
ctttttacacttaaaactgctcctcggaagaaattgaaagtttttggatctgctggctca
agagaaattattattcctatctatagtgctgaagtctgcacgtggctactcagtaaaatc
gaagaagctatgaaaacagaaactggaatggtgtttacggatgggattgaagccacagag
ctaagctttgcgtga
DBGET
integrated database retrieval system
