Fragilariopsis cylindrus: FRACYDRAFT_171000
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Entry
FRACYDRAFT_171000 CDS
T04784
Name
(GenBank) ATP-dependent protease La
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lon_C
LON_substr_bdg
AAA
AAA_2
AAA_5
AAA_22
ChlI
AAA_16
AAA_3
RuvB_N
AAA_PrkA
bpMoxR
TIP49
AAA_18
NTPase_1
AAA_30
AAA_14
AAA_28
RNA_helicase
Cytidylate_kin
AAA_24
nSTAND3
AAA_19
TsaE
MCM
AAA_25
AAA_17
Cytidylate_kin2
Parvo_NS1
Mg_chelatase
NACHT
AAA_6
NB-ARC
RsgA_GTPase
AAA_11
AAA_7
MiaE_2
AAA_23
DUF6594
DFF-C
Motif
Other DBs
NCBI-ProteinID:
OEU13466
JGI:
171000
UniProt:
A0A1E7F5N4
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MGYGDEAPRMPHVLALPVTNRPLFPGVVTSVTLTEPATIDAIERLQTENNGSNVYISAFL
RKKNPTGVSEGGVLLPTPEVITDSSDLYSVGTFAQIHRLTRGVDGGATASVLLLAHRRVN
LLSVDSLGPPIDVTISHWPRLDYTGSPDDTIRALINEILSTIREVAQINPLFRENVQFFS
GRLDANDPYRLADFAASVCSAGVIPEDLQAILEEKDPEMRLHKALVLLSKEREVSKLQQE
IQSKVEEKMTESQRRYFLTEQLKSIKKELGMERDDKEALIEKYRKQLAKYSNIPEEVNKT
IELELEKLSTLEMNSSEYNVTRNYLDWLCGVPWNVASEENFDIQEARKILNRDHYGLNDV
KDTILEFIAVGKLKGSVQGQIICLAGPPGTGKTSIAKSVAEALGREFFRFSVGGLSNVSE
IKGHRRTYVGAMPGKIIQALKKTGTFNPVILIDEIDKLGQGHQGDPASALLEVLDPSQNT
SFLDHYLDEAVDISKVLFMCTANELERIPEPLLDRMEVIRLSGYDFPEKVAIAEQYLVPK
SMRNNGLLSELKAPSGVGIATDAIESLVRWYAREAGVRNLSKYIDRITRKLALQIVAEDE
GSEISKKSARKSESWTVTDDNLEDYVGKHVYTSDRLYEKDPLPNGIVMGLAYTSMGGCAL
YIETQGIKRGLDENGKQRGGGTLKATGNLKDVMKESSQIAYTVARARLAEIDPSNDYFDK
TDIHMHVPEGATPKDGPSAGVAMVTSFLSLALGKPIRNDLAMTGEVSLTGKVLPVGGIKE
KIMGGKRAGISSIILPDANRRDYDEIPDYLKEGLDVHFAESYDTVHEITLGDK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggttacggagacgaagcaccacggatgcctcacgttttggctcttcctgtcacaaat
agacccctatttccaggtgttgtaacatcggttacgttaacagaaccagcaaccattgat
gctatcgaacgtcttcaaacagaaaacaatggaagcaatgtatacatcagtgccttttta
aggaagaaaaatcccacgggtgtttcggagggaggggtactactgccaacccccgaggtg
atcacggattcttctgatttgtattctgtaggaacatttgcacaaattcatagattgaca
cgtggagtcgatggtggtgcgacagcgtcagtactgttattggcgcatcgacgagttaat
ctattgagcgtcgacagtctgggaccaccgatcgacgtaacaatttcgcactggccgcgt
cttgattatactggatcacccgacgatacgatcagagcactaatcaatgaaattctaagt
accattcgagaagtagcccaaattaatcctctttttcgagagaatgtacaattcttttcc
ggacgacttgatgccaacgatccctaccgtttggcggactttgctgcaagtgtgtgctcc
gctggagttatccccgaagacttacaggccattctagaagaaaaggatcccgaaatgcgt
cttcataaggcactagttttgttgtcgaaggaacgggaggttagtaaattgcaacaggag
atacaatcaaaagttgaagaaaaaatgaccgaatcgcaacgtcgatactttttaactgaa
caattgaaatcgatcaaaaaggaacttgggatggaaagagatgataaagaggcattaatt
gaaaagtacagaaaacagcttgctaaatattctaatatccccgaagaagtgaataagacg
attgagttagaacttgagaaactatctacgttggagatgaattctagcgaatacaacgtc
actcgtaactatctcgattggctttgcggagtaccgtggaacgttgccagtgaagaaaat
tttgatatccaagaagcccggaaaattttaaatcgcgaccattatggactgaacgatgtc
aaggacacaattttagaattcatcgctgttggtaaactaaagggaagtgttcagggacag
ataatttgtttggctggacctccaggtactggaaaaacctccatagcaaaatcagttgct
gaagctttgggaagagagttctttcgattctccgttggtggtttgagtaacgtgagcgaa
atcaagggtcatcgaagaacatacgtaggggcaatgcccggtaagattattcaggcactg
aagaagacaggtacatttaatcctgtcatactcattgatgagatcgacaagttagggcag
ggtcatcaaggagatcccgctagtgctctcttggaggtgttggatcctagtcaaaatacc
tccttccttgaccactatttggacgaggcagtggatattagtaaagtcctttttatgtgt
accgctaacgagttggagcgcataccggaaccattgctcgatcgtatggaagtgatccga
ttatctggatacgacttccccgaaaaggtagccattgcagaacaatatttggttccaaag
tcgatgagaaacaatggtctgctaagcgaattgaaagctccttctggagtgggcatcgcc
acagatgccattgaaagtctagtgcgttggtatgcccgcgaggctggagtgagaaacctt
tcgaaatacattgacagaatcactcgaaagcttgctcttcagattgttgcagaagatgag
ggatcagagatcagcaagaaaagtgcaagaaaatctgaatcgtggacagtgacagatgat
aatcttgaggattatgttggaaaacatgtctacactagtgatcgtctgtacgagaaggat
ccattgccaaatgggattgtgatgggactggcatacacttctatgggtggatgcgcactg
tacatcgaaactcagggaataaaacgcggactggatgaaaatggcaaacaacgaggagga
gggacgctaaaggctaccggaaatttaaaagacgttatgaaggagagctcccaaatagca
tatactgtagcgcgtgctcgcttggcagaaatcgaccctagcaacgattacttcgataag
accgatatccatatgcatgttcctgaaggggcgacacctaaagatggtccctctgcgggg
gttgctatggtaacgtcatttctttcacttgccctagggaaacctatacgaaacgattta
gccatgacaggtgaggttagtttgacaggcaaagtccttccagttggaggaattaaagag
aagatcatgggaggaaagcgtgctggaataagttccattattctccccgacgccaatcga
agagattatgacgaaatccccgattacttgaaagagggattggacgttcattttgcagaa
agttatgatacggttcacgaaataacattaggagataaataa
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