Flavobacterium endoglycinae: J0383_00795
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Entry
J0383_00795 CDS
T08015
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
fen
Flavobacterium endoglycinae
Pathway
fen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J0383_00795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_00795
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J0383_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QSW89365
LinkDB
All DBs
Position
complement(194915..195694)
Genome browser
AA seq
259 aa
AA seq
DB search
MRSIWTGSVSFGLINIPIKMFSAVQESSLDMDMLDAKDHANIKFKRVNENTGKEVDYANI
VKGYNLEGKYVILEDSDFEAADAIKTKTIDIESFAFEKEIESIYYEQPYYLEPDKGAMNA
YGLLRDALQASGKVGVTRFVLRNKESLAILKPYKNVIVLNRIRFEQEIRGTDELKLPAMS
KKSTKEMDMAEKLIDQLTEKFDISGFKDEYTAKLLNIIKKKAKGKPQKAAPKMKVVHKQN
DDLMSMLKASLETKKKKSS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaatttggacaggttcagtaagttttggattaattaatattcctataaaaatg
ttttcggcagtgcaggagagcagtcttgatatggatatgctggatgcaaaagaccatgcg
aatataaaattcaaacgtgtcaatgaaaacacaggaaaagaagttgattatgccaatatc
gtaaaaggctacaatttagaaggtaaatatgtcattctggaagattctgattttgaagcg
gcagatgccataaaaaccaaaactattgatattgaaagttttgctttcgaaaaagaaatc
gaaagtatctactacgaacaaccatattaccttgaacccgacaaaggtgctatgaatgcg
tatggcttattgcgcgatgcgttgcaagcttctggaaaagtgggggttacgcgatttgta
ttgcgaaacaaggaaagtctggcgattttaaaaccgtataaaaatgtaattgttttaaac
agaatccgttttgaacaggaaattcgaggaactgatgaattaaaattgcctgccatgtct
aaaaaatcaactaaagaaatggatatggccgaaaaattaatcgatcagctgactgagaaa
tttgatatttcaggttttaaagacgaatatactgctaaacttttgaatattattaaaaag
aaagccaaaggaaaaccacaaaaagcagctccaaaaatgaaagttgttcacaaacaaaac
gacgatttaatgtcgatgttaaaagctagtcttgaaacgaaaaagaaaaaatcctcttaa
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