Flavobacterium fluviale: HYN86_19800
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Entry
HYN86_19800 CDS
T07714
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ffl
Flavobacterium fluviale
Pathway
ffl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HYN86_19800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffl03400
]
HYN86_19800
DNA repair and recombination proteins [BR:
ffl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HYN86_19800
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AXB58707
UniProt:
A0A344LXR5
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All DBs
Position
complement(4591328..4592107)
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AA seq
259 aa
AA seq
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MRSIWTGSVSFGLINIPIKIFSAVEESNLDMDMLDKKDHAHIKFKRVNEDTGKEVDFANI
VKGYKLDDKYVILDDSDFEAADAIKTKTIDIESFVLEKEIQSIYYEQPYYLEPDKGAMNA
YGLLRDALQASGKVGVTRFVLRNKESLAILKPYKDVIVLNRIRFEQEIRSTSELKLPPMS
KKSTKEMDMAEKLIDQLTEKFDITGFKDEYTAKLLDIIKKKAKGKPQKASPKLKVVHKQS
DDLMEMLKASLETKKKKSS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaatttggacaggttcagttagttttggattaattaatattccgataaaaatc
ttttctgcagtagaggaaagcaatcttgatatggatatgcttgataaaaaagatcatgcc
catattaagtttaaacgagtcaacgaagacactggtaaagaagttgattttgccaatata
gtgaaaggctataaattggatgacaaatatgtcattctagacgattcagattttgaagcg
gcggacgccatcaaaacgaaaactatcgatattgaaagttttgttcttgaaaaagaaatt
caaagtatttattatgaacagccgtattatctggaaccagacaaaggtgcaatgaatgct
tacggactgcttcgtgatgcgcttcaggcttcaggaaaagtgggcgtgacacgttttgtt
ttaagaaataaagaaagtcttgcgattttaaaaccttataaagatgtaattgttttaaat
cgaattcggtttgaacaggaaattagaagtacaagcgaattaaaattaccgccaatgtcc
aaaaaatctaccaaagaaatggatatggccgaaaaactaatagatcagcttacagagaaa
tttgacatcacaggatttaaagacgaatacactgccaaacttttggatatcattaaaaag
aaagccaaaggaaaacctcaaaaagcttctccaaaacttaaagtcgtacacaaacaaagt
gatgatttaatggaaatgctgaaagcaagtcttgaaactaaaaagaaaaaatcatcttaa
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