KEGG   Fimbriimonas ginsengisoli: OP10G_3151Help
Entry
OP10G_3151        CDS       T03038                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
fgi  Fimbriimonas ginsengisoli
Pathway
fgi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    OP10G_3151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fgi03400]
    OP10G_3151
Enzymes [BR:fgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     OP10G_3151
DNA repair and recombination proteins [BR:fgi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     OP10G_3151
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S L27_1
Motif
Other DBs
NCBI-ProteinID: AIE86519
UniProt: A0A068NXY8
LinkDB All DBs
Position
complement(3436414..3438456)
Genome map
AA seq 680 aa AA seqDB search
MKENSGFDVKKLPADLRAILEAAPKRPFPKAVKPMLATLVDKPFDDDSWSFEIKWDGYRA
IALLNEGRVDLTSRNEKSFNEKFYSVLTALQSWKLNAVIDGEITVTSPNGVSSFGALQNW
RSEADGLLIFYAFDLLWLEGKDLTNLPLTERRSLLRALIPPENEAIRFSENFEGQGIQVF
EAAVKLGLEGIIAKKNNSVYRPGDRTSDWLKIKAHKRQEVVIGGYTKNEGSSKPFSSLLV
GVFEGDQLKYTGKIGTGFDIKTQRSMLAQFQPLIRETSPFTTVPDINSPSRFRPDPPKAT
ATWLEPRLVCEVSFTEMTSDQVMRHPSFEGMRADKSARNVVLEKEQDTATLTDTHGASKK
VLTPRGTSERKTLLNPTDASQVRKIDGHDLKFTNLSKLYWPEDNITKRDLLNYYYQVAPY
ILPYLKDRPQSLNRHPNGIHGKQFYQKDVKGKVPDWVHTFAYYSEADAREKEFFVCDDEA
SLLYLVSLGCIEISPWNSRAEAPDNPDWCVIDLDPDHNSFEEVIVVAQVVHKLLDLLEVP
SYCKTSGSTGLHVYIPLGAKYTYEESKEFARALVTRVHAEIPDITSIERKVADREGKMYL
DFLQNRPQATLAAPYCVRPKPGAPVSMPLHWDEVKKGLHMTDFTIANAIDRIRSVGDIFK
PVLGKGIRLEETLKKLDAMR
NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt
atgaaagagaactccggattcgatgtgaagaagctgcccgccgatttgagagcgattctc
gaggccgctcccaagcggccgttcccgaaagcagttaagccgatgcttgccaccctcgtc
gacaagccgttcgacgacgactcttggtcgttcgagatcaagtgggatgggtaccgcgcg
attgcgcttctgaacgaaggacgggtcgatcttacgtctcggaatgaaaagtcgttcaat
gagaagttctattccgttctgaccgccttgcagagctggaaactcaatgccgtgatcgac
ggcgagatcacggtcacgagccccaatggagtatcaagcttcggcgcgttgcagaactgg
cgcagcgaggccgacgggctcctcatcttctacgccttcgacctcttatggctggaaggg
aaagacctcaccaacctcccccttaccgaaaggcgatcgttgcttcgggcactgattccg
ccagaaaacgaggcgatccgctttagcgagaatttcgaaggtcaagggatccaagttttc
gaagcggcggtgaaacttgggctggaagggatcatcgccaagaagaacaacagcgtctac
cggccgggcgatcgtaccagcgattggctcaagatcaaggcgcataagcggcaggaagtc
gtcatcggtgggtacaccaagaacgaaggatcgagtaagccgttcagctcgctcctcgtc
ggcgtcttcgagggcgaccagcttaagtacaccggcaagatcggcaccggattcgatatc
aagacccagcgatctatgctcgcgcagttccagcctctaattcgcgagaccagccccttt
accacggtcccggacatcaacagtccgtcacggttccgccccgaccctccgaaggcgacg
gcgacatggctcgagccgaggctcgtgtgcgaagtgagtttcaccgagatgacctccgac
caagtcatgcgccacccgtctttcgagggaatgagggcagacaagagcgcgcgcaacgtc
gttctcgaaaaggagcaagatacggcgactctgaccgatacccacggcgcaagcaagaag
gttctaacgccaagagggacgagcgagcggaagactctcctgaatccaaccgacgcgagc
caggttcgcaaaatagacggtcatgacctaaagttcacgaacttaagcaaactctattgg
ccggaagataacatcaccaagcgcgatctgttgaactactactaccaggtcgcgccgtac
atcctgccgtatctaaaggaccgaccgcaatcgctaaatcggcatcctaacggcattcac
ggcaaacagttctatcagaaggacgtaaaggggaaggttccggattgggtgcacaccttc
gcctattacagcgaagccgacgcacgagaaaaggaattcttcgtctgcgacgacgaggcg
agcctcctctatttggtttcactcggctgcatcgagatcagcccctggaacagtagagcc
gaggcgccagacaacccggattggtgcgtgatcgatctcgatcccgaccacaacagtttc
gaggaggtcatcgtcgtagcgcaggtcgtccataagcttctcgaccttcttgaggtgccc
tcttactgcaaaacgtccggctcaaccgggctgcacgtctacattcccttgggcgcgaaa
tacacctacgaggagtccaaggagttcgcccgcgccctagtaactcgcgtgcacgcggag
atccccgacatcacaagcatcgagcgcaaggtggcggaccgcgagggcaagatgtacctc
gacttcttacaaaaccgaccgcaggcgaccctcgccgctccgtactgcgtgcgccccaag
cccggcgcccccgtctccatgccgctccactgggatgaggtgaagaagggcctccacatg
accgactttacgatcgccaacgcgatcgaccgcattaggtccgtcggagatatcttcaag
cccgtactcggaaaaggaataaggctagaagagacgttgaagaaactagatgccatgcgt
taa

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