Fusarium graminearum: FGSG_05413
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Entry
FGSG_05413 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_05413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_05413
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_05413
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FGSG_05413
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
FGSG_05413
COMPASS/SET1 complex (yeast)
FGSG_05413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
DUF658
CAP_assoc_N
Motif
Other DBs
NCBI-GeneID:
23552596
NCBI-ProteinID:
XP_011323945
UniProt:
I1RN49
LinkDB
All DBs
Position
3:complement(2184061..2185597)
Genome browser
AA seq
381 aa
AA seq
DB search
MSSTPMDIDRSNTPNGASLNIHRTIGTTASVSNLSDVIGNFRPTKLFRRDDIKETRPQPH
VLSLDYDDEGEFVMASASDETIQIYNVKEGRHDKSLVSKKYGVKLAKFTHTNSSIIYAST
KQNDAIRYLATHDNSFIRYFDGHEGAVTSLAVHPGSDNFISCSQDNTVLLWDTQTKNYHG
KLFLRSPYLAAYDPSGTVFAVACVSSGTVLLYDARNYDKAPFATVDIVEQCRKVDSQCLN
KGWTTLEFSNDGKSLLVGTRGNGHFLVDAFEGTLKAYLHKPNGGTRRLAVGEAAQAGGDT
NHIESSGECCFAPDGRYVLSGSKKDVLVWDTMAAPDDNKVLKPSWTLPDKREAAVLAFNP
RYNFFATADQELLFWLPDPLA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacacccatggatatcgatcgttccaacactccaaatggggcatcgcttaac
attcaccgcaccattggcaccacagcttcagtctccaatctgtccgatgtcataggcaac
tttcgacctaccaagctcttccgccgtgatgacatcaaggaaacccgcccacagccccat
gtactatccctggactacgacgacgaaggcgagtttgttatggcgtcagcaagcgacgaa
acaatacagatttacaacgtcaaagaaggtcgtcacgataagagcctggtcagcaaaaag
tacggggtgaagcttgccaagttcacacatacaaattcaagtatcatatatgctagtaca
aaacaaaatgatgccattcgatacctcgctacgcacgataactccttcatccggtacttt
gatggtcacgaaggggctgtgacatcactggctgtccatcctggtagcgataatttcata
tcatgttcccaggacaacacagtgcttctatgggacacacagactaagaactaccatggc
aagctcttccttcgatcgccctacctcgccgcgtatgatccgtcagggactgtctttgct
gtggcttgtgtcagcagcggtacagtcctactttatgacgcacgaaactacgacaaagct
ccctttgccacggttgacattgttgagcagtgcagaaaggtagactcgcaatgcctcaac
aaggggtggacgacacttgagttctctaacgacggcaaatcgctactagttggaactcgc
ggcaatgggcatttcttggtcgacgccttcgagggcacgctcaaggcatatcttcacaaa
ccaaacggcggaactcggcggttggcagttggagaggcggcacaggctggcggtgatacg
aaccacatcgagagtagcggcgagtgctgctttgccccagatggccgctatgtcctcagc
ggctccaagaaagacgtcttggtctgggacaccatggctgcccctgacgataataaagtg
ttgaaaccaagctggacattgcctgataagagagaggctgccgttctagctttcaaccca
cggtacaactttttcgccacggctgaccaggagctgttgttttggttacctgatcctctt
gcctaa
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