Francisella halioticida: CDV26_06630
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Entry
CDV26_06630 CDS
T04972
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fha
Francisella halioticida
Pathway
fha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDV26_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fha03400
]
CDV26_06630
Enzymes [BR:
fha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDV26_06630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDV26_06630
DNA repair and recombination proteins [BR:
fha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDV26_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ASG68105
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All DBs
Position
1229799..1230623
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AA seq
274 aa
AA seq
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MPELPEVETVKMGLTKNIIGKNILNIEIYTDKLRYPIEKDLLSNIKNKEIKNIQRRGKHL
LITLEKDLQLIIHLGMSGVIKIKKTSQYDKIKHDHIILRLSDNISLIYNDPRKFGYWLIN
INSSPLEHKVLASHGVEPLTNDFNPKYLITKLSKTSRKIKQTIMDNSIVVGVGNIYASEA
FFDSNILPTRASNTITKKEVEKLVNSIKKILEKAIAEGGTTLKDYQNTEGKPGYFTQQLN
VYGRVNQECYTCNTKIQSIVIGQRNTFYCKKCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaagtagaaactgtaaagatgggcttaactaaaaatattattggt
aaaaatattcttaatatagaaatatatacagacaaacttcgctaccctatagaaaaagat
ttactctcaaacatcaaaaataaagaaataaaaaatatccaaagaagaggtaaacatctt
ctaataacactagaaaaagatttacaacttataatacacttaggaatgtccggtgtaata
aaaattaaaaaaacaagtcagtatgacaagataaaacatgatcacataatcttaagactt
tcagacaatattagcttaatttataatgacccacgtaaatttggttactggttaattaat
ataaattcttcaccacttgagcacaaagttttagcctctcatggtgtagaacctttgaca
aacgatttcaaccccaaatatttaattacaaaactttcaaaaacctcaagaaaaattaaa
caaacaattatggataactccatagttgttggagttggcaatatttatgctagtgaagca
ttttttgatagtaatatactacccactagagcctctaatacgatcacaaagaaagaggtt
gaaaagcttgtaaattctataaaaaagatattagaaaaagctatagcagagggaggtact
actcttaaagactatcaaaatacagaaggtaagccaggctactttactcaacaattaaat
gtttacggcagagtaaatcaagaatgttacacttgcaatacaaaaatccagagcatagtt
attggccaaagaaatactttttattgtaaaaagtgtcagaaataa
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