Candidatus Filomicrobium marinum W: BN1229_v1_0069
Help
Entry
BN1229_v1_0069 CDS
T03856
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fil03021
]
BN1229_v1_0069 (rpoH)
Transcription machinery [BR:
fil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1229_v1_0069 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF3431
Motif
Other DBs
NCBI-ProteinID:
CFW97851
UniProt:
A0A0D6JA92
LinkDB
All DBs
Position
1:68422..69309
Genome browser
AA seq
295 aa
AA seq
DB search
MASKTLPTVSGGSVGLSRYMEEIRKFPMLEPDEEFMLAKRWQEHEDSEAAHKLVTSHLRL
VARIAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPDRGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRRAKSQLQALEDGDLRPDQVKAIATKLGVTEEDVISMNRRL
GGDASLNAPLRAEPDSGEWQDWLVDDAPDQEEQLAEQEELGMRRNYLSEALSTLNERERR
IFEARRLAEDPSTLEDLSGEFGVSRERIRQIEVRAFEKVQKAVQKAALEAEREEA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaaactcttccgacagtcagcggcggatcggttggactgtcccggtacatg
gaagaaatccgcaaattcccgatgctcgagccggacgaggagttcatgctcgccaagcgg
tggcaggaacatgaagattccgaagcggctcacaagctcgtcacgtcgcaccttcgctta
gttgcccggattgcgatgggctatcgcggctacggtttgccgatcggtgaggtgatctcc
gaaggcaacgtcggcttgatgcaagcggtgaagcgtttcgatccggatcgcgggttccgc
ctcgcgacctacgcgatgtggtggatccgtgcttcgatccaggaatacatcctgcgttcg
tggagccttgtgaaaatgggcaccacggcggcgcagaagaagctcttcttcaacctgcgc
cgggccaagagccagttgcaggctctggaggacggggacctgcgccctgaccaggtgaag
gcgatcgcaacgaaactcggcgttaccgaagaagacgtcatttcgatgaatcggcgtctg
ggtggcgatgcttctctcaatgcgccgctccgtgctgaaccggattcgggtgaatggcag
gattggctcgttgatgatgctccggatcaggaagagcagcttgcggaacaggaagagctc
ggcatgcgccgcaactatctgtccgaagcgctttcgactctcaatgagcgggagcggagg
attttcgaggcccggagattggctgaagatccttcgacgcttgaagatctgtctggtgag
tttggcgtgagccgcgagcgtattcgacagattgaggtgcgtgccttcgagaaggttcag
aaggcggttcagaaagcagccctagaggctgagcgcgaagaggcttaa
DBGET
integrated database retrieval system
