Candidatus Filomicrobium marinum Y: BN1229_v1_0071
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Entry
BN1229_v1_0071 CDS
T03857
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fiy03021
]
BN1229_v1_0071 (rpoH)
Transcription machinery [BR:
fiy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1229_v1_0071 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF3431
Motif
Other DBs
NCBI-ProteinID:
CPR14793
UniProt:
A0A0D6JA92
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Position
1:68417..69304
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AA seq
295 aa
AA seq
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MASKTLPTVSGGSVGLSRYMEEIRKFPMLEPDEEFMLAKRWQEHEDSEAAHKLVTSHLRL
VARIAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPDRGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRRAKSQLQALEDGDLRPDQVKAIATKLGVTEEDVISMNRRL
GGDASLNAPLRAEPDSGEWQDWLVDDAPDQEEQLAEQEELGMRRNYLSEALSTLNERERR
IFEARRLAEDPSTLEDLSGEFGVSRERIRQIEVRAFEKVQKAVQKAALEAEREEA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaaactcttccgacagtcagcggcggatcggttggactgtcccggtacatg
gaagaaatccgcaaattcccgatgctcgagccggacgaggagttcatgctcgccaagcgg
tggcaggaacatgaagattccgaagcggctcacaagctcgtcacgtcgcaccttcgctta
gttgcccggattgcgatgggctatcgcggctacggtttgccgatcggtgaggtgatctcc
gaaggcaacgtcggcttgatgcaagcggtgaagcgtttcgatccggatcgcgggttccgc
ctcgcgacctacgcgatgtggtggatccgtgcttcgatccaggaatacatcctgcgttcg
tggagccttgtgaaaatgggcaccacggcggcgcagaagaagctcttcttcaacctgcgc
cgggccaagagccagttgcaggctctggaggacggggacctgcgccctgaccaggtgaag
gcgatcgcaacgaaactcggcgttaccgaagaagacgtcatttcgatgaatcggcgtctg
ggtggcgatgcttctctcaatgcgccgctccgtgctgaaccggattcgggtgaatggcag
gattggctcgttgatgatgctccggatcaggaagagcagcttgcggaacaggaagagctc
ggcatgcgccgcaactatctgtccgaagcgctttcgactctcaatgagcgggagcggagg
attttcgaggcccggagattggctgaagatccttcgacgcttgaagatctgtctggtgag
tttggcgtgagccgcgagcgtattcgacagattgaggtgcgtgccttcgagaaggttcag
aaggcggttcagaaagcagccctagaggctgagcgcgaagaggcttaa
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