Fulvivirga ligni: LVD16_06310
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Entry
LVD16_06310 CDS
T09288
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
flw
Fulvivirga ligni
Pathway
flw00920
Sulfur metabolism
flw01100
Metabolic pathways
flw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LVD16_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_06310
Enzymes [BR:
flw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LVD16_06310
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LVD16_06310
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LVD16_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UII22834
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All DBs
Position
1409107..1410135
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AA seq
342 aa
AA seq
DB search
MQNLEAFKTLISTPKRVVITMHHKPDADALGSSLGLAEYLKMKGHEVTVVSPTDYANFLS
WMHGNDEVLVYNEGNEDKTHAIIDEADMIFCLDFSNLSRINELGEKVREATCTKVLIDHH
LEPEDFADFQLWTTEAAATAELVYDLICMLGDKEMINRDIAEALYAGIMTDTGNFKHSNT
TKHVFVVCGELAAIGADISKVAKLVYDTNSLDKVKFLGFALNERLKVVQEYHTAYFAISA
EDLKQFNSKTGDTEGLVNYALSIEGIKFAALLIDRTEAVKMSFRSVGDFSVNEFARKNFE
GGGHKNAAGGKSDLTLEETVDKFEKLLDEYKNQLSNPIKTYA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatctggaagcttttaagacgctaatcagtactcctaaacgggtggtcattacc
atgcaccataaacccgatgctgatgcgcttggctcctctttggggttagcagagtatttg
aagatgaaggggcatgaggtaactgtggtttcgcctactgattatgctaactttttaagt
tggatgcacgggaatgacgaggtgctggtttataatgaagggaatgaggataaaactcat
gccataatagatgaggctgatatgatcttctgccttgatttttctaacctaagcagaata
aacgagctgggagagaaagtaagagaggctacttgtactaaggtgctcatagatcatcat
ttggagcctgaagattttgccgacttccagctttggactacagaggctgctgctacagca
gagttggtttatgatctaatctgcatgctaggtgataaggaaatgatcaatagagacatt
gctgaagctctgtatgccggaatcatgaccgatacaggcaacttcaagcactcaaacacc
accaaacatgtttttgtagtgtgcggagagctggctgccataggagcagacatttccaag
gttgccaaacttgtttatgataccaatagccttgataaagttaagtttttaggttttgcc
ttaaatgaaagactcaaggtggtgcaagaatatcacaccgcatattttgcgatttccgca
gaagacctcaagcaatttaattctaaaacaggagataccgaaggcctggtaaactatgct
ctttccattgaagggattaagtttgcagcgctgcttatcgatagaactgaggccgtaaag
atgtcattcagatctgttggtgatttttctgtgaatgaatttgctcgtaagaattttgaa
ggaggagggcataaaaatgccgctgggggtaaatctgaccttacgctggaggaaacggta
gataaatttgaaaaactattagacgaatataaaaaccaattaagtaacccaataaaaaca
tacgcttag
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