Fulvivirga ligni: LVD16_15695
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Entry
LVD16_15695 CDS
T09288
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
flw
Fulvivirga ligni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
LigD_N
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_primase_S
RNA_ligase
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
UII19287
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Position
3675253..3677568
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AA seq
771 aa
AA seq
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MAKDVTYVQVGKHKLELSNLQKVLYPDDHIVKAEVLQYYLKIAPTILSHIKGRPLSLVRF
PDGVEGERFFQKNKPDWAPDWIESVKLGGEVKDYMMANEEATLVWLANLACLELHQMHAK
RPHHDKPDYIVYDLDPPEQYDFEELKSIAFKLKDHIESFGYQVFVKTTGGKGLHLVTPVL
PRWTFEECFNAAKAIAQPFVEKNANTTLQIKKDARKGRVLIDIYRNRTSQTIVAPYSLRG
YEGAPVSMPLTWEELEDIESAQDFNIENALDKILEDGDAWQALPAYAEELHTHRKEKAKP
KKLGPNARHKTPEQLEDYSKKRNFKKTPEPQGLYEGGDDTGFVIHRHHASHLHYDLRLEQ
NGVLRSWAVPKGMPPYPGVKRLAVATEDHPMKYITFEGEIPKGQYGGGNMWIYANGRYEI
TKEKKDGFYFALHSPQMNAEYRMHKMKDKEWLLERVDNPQLDWLRHPVEPMLADSAENVP
SGEEYIYEVKWDGIRALIVLDEGELNIYSRNHKLLNKQFPELMIPAEAFRVTSGVFDGEI
VCFDSAGRPNFKNVIHRMQRTADGDIQRSMKKYPAFCYLFDCLMLDGRPLVNDPLLRRRE
WLEDSVRKGGSYRISETVEEGQELFEAAKKMQLEGIMAKDVNSRYIPGKRSAGWIKVKVR
QSAEALIIGYTEGRGDREELFGALQLAERVDGELVYRGKVGTGFNSKSMKELYDVLKKKK
KIKRPVEEKPLDDAKTTWIEPELYAEIQYSMLTHNGTYREPVYLRLRPDLV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgttacatatgttcaggtaggaaaacataagttggaactctccaatttg
cagaaagttttataccctgatgatcatattgtgaaggctgaagtgcttcagtattatctg
aaaattgctcctaccattttgtctcatatcaaaggaaggcccctgtcattggtacgcttt
cctgatggtgtggagggtgaaaggttcttccagaagaataagccagattgggctcctgat
tggatagaatcggtgaagctcggtggagaggtgaaagattatatgatggctaatgaagaa
gctaccttagtgtggcttgcaaaccttgcgtgtttggagctccatcagatgcacgccaaa
aggccacaccacgataaacctgactacattgtttatgatttagatccgccagagcagtat
gattttgaagagctgaaaagcattgcatttaaactgaaagatcatattgaatcatttggt
tatcaggtgtttgtgaaaaccaccggaggtaaaggtttacatctggtaacacctgttttg
cctcgctggaccttcgaggaatgctttaatgcagccaaggctatagcacagccttttgta
gagaaaaacgctaacaccaccttgcagattaagaaagacgcacgcaagggccgggtgctc
attgatatctatcgaaatagaactagccaaactattgtggcgccttacagtctccgtggc
tatgagggagcgccggtttctatgccgcttacctgggaagagcttgaggacatagagagt
gctcaggatttcaatattgaaaatgccttagataaaatcttggaagatggagatgcctgg
caggcattgccggcttatgctgaagaattgcatacacacagaaaggagaaagctaagcct
aagaagttgggaccaaatgccagacataaaactcccgaacagctggaagactattcaaaa
aagcgaaattttaaaaagacccctgagccccaggggttgtatgaaggtggtgatgatacc
ggatttgttatccatcggcaccacgcctcgcatttgcattatgatttaaggttggagcag
aacggtgtattaagatcctgggcagtgcctaaaggcatgcccccatatccgggggtaaaa
cggttggcggtggctacggaggatcatcctatgaagtacatcaccttcgaaggagaaata
cccaagggccaatacggaggcggtaatatgtggatttatgccaatggaaggtatgagatt
accaaagagaagaaggatggcttttatttcgccttgcatagtccgcagatgaatgccgaa
taccgcatgcataagatgaaggataaggagtggctattggagcgtgtggacaatccgcag
ctagactggttaaggcatcctgtggagcctatgcttgccgatagcgcggagaacgtgcct
tcgggtgaagagtatatctatgaggtgaaatgggacggtatacgagctctaatcgtcttg
gatgagggggagctgaatatctatagtagaaatcataaattgctcaataagcaatttcct
gagctaatgatacctgctgaggcttttagagtcacttcaggtgtatttgatggcgaaata
gtgtgttttgacagtgcaggaaggccaaacttcaaaaacgtaattcacagaatgcaaaga
acagcggacggggacattcaaagaagcatgaagaaataccccgctttttgctatttattc
gattgtctgatgctggatgggcgacctctggtgaatgatccattactccgaagaagggaa
tggctggaggactctgtgaggaagggaggcagttaccgaatcagtgaaactgtagaggag
ggtcaggagctgttcgaggccgccaagaaaatgcagcttgagggcattatggctaaagat
gtgaacagcagatatattccaggtaaaagaagtgcgggctggataaaagtgaaagtgagg
caatctgctgaagcgctcattatcgggtacacagaaggcaggggagatagagaggaatta
ttcggtgccttgcaattggctgagagggtagatggtgaattggtctaccgtggtaaagta
ggaaccggctttaacagtaagtcgatgaaggagctatatgatgtgctgaaaaagaagaaa
aaaataaagagacctgtggaagaaaagccactggatgatgcaaaaactacatggatcgag
cctgaattatacgcggagatacaatattctatgcttacacataacggaacctaccgcgag
ccggtatatttgcgactaagacccgatttggtataa
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