Fulvivirga ligni: LVD16_15700
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Entry
LVD16_15700 CDS
T09288
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LVD16_15700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_15700
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LVD16_15700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
NagA_C
EFP
Colicin_E5
CDC48_N
PGDYG
Motif
Other DBs
NCBI-ProteinID:
UII19288
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All DBs
Position
3677703..3678557
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AA seq
284 aa
AA seq
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MRAIWKGHIRFSLVTIPIRIYTAIDSGRTIRFNQLSKENKNPVTYEKKDKVTGDVLKADD
IIKGYQYEPGQYVIINNEDFEKIKLKSTKVIEIEGFVDENEIHPALYDSPYFIGPDGDIA
SKTYSLLMQTLKQTGKIGVGRVVLRERESLVLLTPHEENGMMLYKLRNPDELRSVNEVPG
LSKVDEADKEQLKLAKTLVDSMSKSFEKIDTTDHYYDALKEMIEAKIDGKEVVSYTEQEP
EVKDIMTALKESIDQAKAEKKPMKKATGKTKKTAEKKTKSKKAS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaatttggaaaggtcatatccggttttcattagttaccatccccatccgtatt
tataccgctatagattcaggcagaaccatccggttcaatcaactttctaaggagaataag
aatcctgtaacgtatgagaaaaaggataaggttacgggtgatgtgctcaaggctgatgac
ataataaaagggtatcagtatgagcccggtcaatatgtgattattaacaatgaagatttc
gagaagatcaaattgaagagcaccaaggtgatagagatagaaggctttgtagatgagaat
gagatacaccctgctttatacgactcaccatatttcattggtcccgatggtgatatcgct
tctaagacctattcactgcttatgcaaacactaaagcaaacaggtaagataggtgtggga
agagtggtgcttcgcgagcgagaaagcctggtgttgctcaccccgcatgaagaaaatggc
atgatgctttacaagttgaggaatcctgatgagctaagaagtgttaatgaagtgccaggt
ctaagcaaagtggatgaggcagataaggagcagctcaaactggctaaaactttggtagac
tccatgagcaagtcttttgagaaaattgataccacagatcattattacgatgccttgaaa
gaaatgatagaagcgaagatcgatggtaaagaagtggtaagctacaccgagcaggagcca
gaagtaaaagatattatgactgctttgaaagaaagtatagatcaggctaaggcagagaaa
aagccaatgaaaaaggctacaggaaagaccaagaaaacagcagagaaaaagaccaagagc
aaaaaggcaagttaa
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