Fulvivirga ligni: LVD16_19025
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Entry
LVD16_19025 CDS
T09288
Name
(GenBank) dCMP deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
flw
Fulvivirga ligni
Pathway
flw00240
Pyrimidine metabolism
flw01100
Metabolic pathways
flw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LVD16_19025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
flw02044
]
LVD16_19025
Enzymes [BR:
flw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LVD16_19025
Secretion system [BR:
flw02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LVD16_19025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC2
NAD1
Glyco_transf_34
Motif
Other DBs
NCBI-ProteinID:
UII19939
LinkDB
All DBs
Position
complement(4524827..4525309)
Genome browser
AA seq
160 aa
AA seq
DB search
MKKPEFDDIFMELAVNLAKRSHCIKRHVGAVLTKDTRIISIGYNGPPAGTHNCDLEWPEK
GCPRDSKGGCSLAIHAEQNALLYAVKNKTEVKGATMYVTLAPCLACARIIYTMGVEKVVF
LNSYAEYKGIESDEGVDFLVKFGVKVERYQGSISAVTEMI
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaccagagtttgacgatatttttatggagttggcagtgaatctggctaaaaga
tcacattgtataaaacgccatgtaggcgctgtactaacaaaagatacgagaatcatttca
ataggttataacggaccgccagccggcacccataactgtgatctggaatggccggaaaaa
ggatgccccagagactccaagggaggttgctcattagctattcatgccgagcaaaatgct
cttttgtatgcagtaaagaataaaacggaggtaaaaggggccactatgtatgtcactctt
gcgccatgtttggcctgtgccagaattatctataccatgggcgtggaaaaggtggttttc
cttaattcatacgcagaatacaaaggtattgaaagtgatgaaggcgtagatttcctggta
aagttcggagtgaaggtagaacgataccaggggagtatatctgctgtaactgaaatgatc
tga
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