KEGG   Fomitiporia mediterranea: FOMMEDRAFT_122296
Entry
FOMMEDRAFT_122296 CDS       T03132                                 
Name
(RefSeq) DNA topoisomerase II
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fme03032]
    FOMMEDRAFT_122296
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_122296
Enzymes [BR:fme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FOMMEDRAFT_122296
DNA replication proteins [BR:fme03032]
 Eukaryotic type
  DNA Topoisomerases
   FOMMEDRAFT_122296
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    FOMMEDRAFT_122296
  Centrosome formation proteins
   Centriole proteins
    FOMMEDRAFT_122296
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB Toprim HATPase_c
Other DBs
NCBI-GeneID: 18671211
NCBI-ProteinID: XP_007266092
JGI: Fomme1_122296
LinkDB
Position
Unknown
AA seq 1509 aa
MDVDDRANGSGDESRPGPSTLDDPAFTRAPMDGKTASEHYKKLTPREHVIARPDSYIGSV
ETITQSMWVYDSDAKRMVFREVSYVPGFLKIVDEIIVNAADNKINDPNMDTIKVNINAKE
GTISVYNNGRGIPIEMHEKEKIMIPEMIFGHLLTSGNYDDTIKKLTGGRNGYGAKLANIY
STEFTLETADKNTAQKYKQTWTKNMSVCGKAKITKNSKGEEFTRVSFTPDFERFKMRGMD
ADALALLKKRVYDLAGTVKDIKVYLNDERLKIKNFKQYVEMYLSSAAAEAAGASGGAAQA
KPSVIYEQLGPRWEIAFAVSDGSFQQVSFANSIATTKGGTHVEYIANQITKHLISTIQRK
NKGATVKPAQIKNHMWIFVNALIENPSFDSQTKETLTKTAGGFGTKPTISEDFMKKVMKT
SLVENVLNWAKFKADQQIKKTDGAKRSRLLGITKLADANNAGTREASKCTLILTEGDSAK
ALAVAGLGVVGRNNFGVFPLRGKMLNVREAKHDQIMKNEEIQNVKKILGLQHNKEYKDIA
SLRYGRLMIMTDQDHDGSHIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGKQRID
FFTLPEFEKWQAETPDSHKWSSKYYKGLGTSKDSDARDYFSNMGKHMIPFATTQEGDREL
IELAFSKKKADERKEWLRQFRPGTYLDHNVDEIPYSDFINKELILFSMADNIRSIPSVAD
GLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEQSLTMTIVNLAQDFVGSNN
MNLLLPNGQYGTRDQGGKDHASARYIYTEPAPISRLVFHQSDDALLNEQKEDGQVIEPEF
YVPILPLVLVNGAEGIGTGWSTTVPSYNPVDIVDNLKRLMKGEELVPMNPWWRGFNGTIK
KTGDNKFEVTGVVKKLNDTTVEITELPIHKWTQAFKAELESMCGEKGDGAVKDYKEHHDN
RNVHFVVNMNAKELEKAEAQGLEEYFKLTSKISTSNMICFDFEGKIKKYNTPEEILEDFF
PVRLGLYQKRKDYLANELQLEHEKLSNQARFVQMIVKKELVVSGRKKVDIVADLRKKNFR
PFPKVAKAKAAGETEDALEDTEAEEQETGTTTDFDYLLGMPIYNLTHEKIEKLLEQARQK
ETELMTLLELTPSQIWNTDLDNFLALWEKTCKEWDESAIKDSSGKTVKRKQATLKTRKSL
TGPFGKRRKDDDDDSEDEFMPSKAAAKAVAKKPDPIERKVSRTKAIIKNESDDDDDLFVA
PGPSKPTARKAAETMRKVSRSKPVTKVVSDDSDDDDDKLTVTKASTKDESDYELPKPPSK
RKALAKADDLEDELALTTEKGKGKAKVAPKRKSLTADEGSDDDDLASSKPPKKKAQVSLR
AFLGKDDGESKAKPPTPSKVAGMKPKPKAAPAKKPVISDEDSDTEVIPAAKSKPKPQPKA
APAKKAAGKAAKKAVSDDDDDVEMDTEPAVAKRTEAPRRAARAAPKKYIDISDDDGDDGG
QDETFEISD
NT seq 4530 nt   +upstreamnt  +downstreamnt
atggatgtcgacgatcgtgctaatgggtcaggggacgagagcaggccgggtccgtcgact
ctcgacgaccctgcttttactcgcgcaccaatggacggtaaaaccgcttcagagcactac
aagaagctcaccccaagagaacacgttattgcacggccagactcttacattgggagcgtc
gaaactataacgcagtccatgtgggtgtatgactcggatgcaaaaagaatggtattcagg
gaagtgagctatgttcccggattcttgaagattgtagacgagatcatcgtgaatgctgcc
gacaacaagatcaacgacccgaatatggatacgatcaaagttaacatcaatgcgaaagaa
ggtaccatctccgtttacaacaacgggaggggtattccaatagaaatgcacgaaaaggag
aaaattatgatacctgaaatgatatttggtcatcttctgacgtctggcaactatgacgat
accatcaagaaactcacgggaggcagaaatggctatggagcgaagctggcaaacatctac
tcgacggagttcaccctggagacggcggacaagaatactgcgcagaagtacaagcaaaca
tggacgaagaacatgtcggtctgtggaaaggcgaaaatcacgaagaatagcaagggcgaa
gaatttactcgtgtatcgttcacgccagactttgaaaggttcaaaatgcgaggaatggac
gccgatgccttggcacttctgaagaagcgcgtttacgatttggctggaaccgtcaaagac
attaaggtctacttgaatgacgaacgccttaagatcaagaatttcaagcagtatgtcgaa
atgtatctcagctctgctgccgcagaagccgccggtgcttcaggaggtgcagcacaagcc
aagccaagcgtcatttacgagcaacttggtccgaggtgggagattgcctttgcggtatcc
gatggctcgtttcagcaagtgtcattcgcgaactcgattgcgacaacaaaggggggaacg
catgtcgaatacatcgcgaatcagatcacaaagcacctcatctcgacaatccagaggaag
aacaagggtgcgacagtcaagccagcacaaatcaagaaccatatgtggattttcgtcaac
gcactcattgaaaatccctcttttgactcgcagacgaaggagactttgacgaaaacggcc
ggtgggtttggtacaaaaccaacgatatcagaagattttatgaagaaagttatgaaaact
agccttgtcgaaaacgttctgaattgggcgaagtttaaagctgaccagcaaattaagaag
actgacggagcaaagcgtagccgactccttggcataacgaagcttgctgacgcgaacaat
gctggaactcgtgaagcttcgaaatgtactcttatactgacagaaggagactctgccaag
gcacttgctgtggccggtctcggtgttgttggccgaaacaactttggtgttttccctttg
cgcggaaaaatgcttaacgtgcgcgaagcgaaacatgatcaaatcatgaagaacgaggag
atccagaatgtcaagaagattctcggtttgcagcacaataaggaatataaagatattgct
agtctgcgttatgggcgtctaatgatcatgacggatcaggatcacgatggttcccatatc
aaaggcttattgattaacttcctcgaccacttctacccatctttgctgaaggtacccgag
ttcctcgtggaattcgtcacaccaatcgttagggtgacaaagggcaaacaacgaatcgat
ttcttcactctacctgagtttgagaaatggcaagcagagacccctgactcgcataaatgg
agctctaagtactacaagggtctcggtacgagcaaagattcagatgctcgcgactacttc
agcaatatgggaaagcacatgatcccgtttgccacgacccaagaaggtgatcgagaatta
attgaactcgctttcagtaaaaagaaagcagacgagcgtaaggagtggctgagacagttc
aggcctggaacgtatcttgaccacaatgtggatgaaatcccatactctgatttcatcaac
aaggagctcattctgttctcaatggcggacaacatccgttctatcccatcggttgcggac
ggattaaaaccgggtcagaggaaggttatctggggttgcttcaagcgcaagttgaagaaa
gaaatcaaggttgcgcaattagtcggttacatctcagaacatgcggcataccatcacggc
gaacagagtttgaccatgactattgtcaatttagcacaagattttgtcgggagtaacaac
atgaatcttctcttgccgaatggtcagtacggtacgcgtgatcagggcggaaaagaccat
gcatcggctcgttacatctacacggagcctgcacctatttcacggctggtcttccatcaa
agtgatgatgcgcttctaaacgaacaaaaggaagatggacaagtcattgagcctgaattt
tacgtgcctatcctcccactcgttctcgtgaatggtgcagaaggtattggtacaggttgg
agcacgactgtaccgtcgtataatcctgtggacatcgttgataatctcaaacgattaatg
aaaggcgaggagttggttccaatgaatccatggtggcgtggcttcaatgggacaataaag
aagactggtgacaacaagtttgaggttaccggagtggtgaagaagctgaacgacacaacg
gttgaaatcaccgagctgccaattcacaagtggacgcaggcatttaaagccgaacttgag
agcatgtgtggcgaaaagggtgatggcgctgtcaaggattataaggaacaccacgacaac
cgtaacgtgcacttcgtcgtgaatatgaatgccaaggaacttgagaaagccgaggcgcaa
ggcttggaagaatacttcaagctcacgtccaagattagcacaagcaacatgatttgtttt
gacttcgagggaaagatcaagaagtacaatacacctgaagaaatccttgaggacttcttc
cccgtaaggctaggcctctatcaaaagcgaaaggactatctcgcgaatgagcttcagctc
gaacacgagaagctgtcaaatcaggcacgattcgtccaaatgattgtcaagaaggagctc
gttgtctcgggtcgtaagaaagtagacattgtcgccgaccttcgcaagaagaatttcagg
ccgttcccgaaggtagcaaaggcgaaggcggctggcgaaaccgaggatgcactagaggat
actgaagctgaggaacaagaaactggtacaacaacagatttcgattacttgctcggcatg
ccgatctacaatctaactcatgagaagattgagaaactcctagagcaggctagacagaag
gagactgagctcatgacgttgctcgaactcactccgagtcagatttggaacacagatctc
gacaatttccttgctctgtgggagaaaacatgcaaggaatgggatgaatccgcgattaaa
gattcctctggaaagaccgtcaagaggaagcaggcaacattgaagacgcgcaagtcccta
acaggtcccttcggaaagaggaggaaagatgatgacgatgactcggaagacgagtttatg
ccttcgaaggcagctgcaaaagctgttgcaaagaaacctgatcccattgagcgcaaggtc
tcccgtactaaggcaatcatcaagaatgaatcagatgatgacgacgacctatttgttgct
cctggtccctcgaagccaactgcgagaaaagcagcagagacaatgcgcaaagtctcccgg
tcgaagcctgtgacgaaggtcgtgtcggacgatagcgatgacgacgacgacaaactgact
gtcactaaggcatcgacaaaggacgaatctgattacgagctaccgaagccgccatcaaag
aggaaagccctcgcaaaggccgacgacttagaagacgaacttgcgctgacaaccgagaag
ggtaaaggaaaggcgaaagtcgcaccaaagcgaaagagtctcacggccgacgaaggtagc
gatgatgatgatcttgcttcttccaagccacctaagaagaaggcgcaagtctcgctccga
gcgttcctcggtaaagatgatggagagtcgaaagccaagcctcctaccccgagtaaggtt
gctgggatgaagccaaagccaaaggctgcacctgcgaaaaagcctgtaatcagcgacgag
gactctgacacggaggttatacctgctgccaaatcgaaaccgaagccacaaccgaaagct
gcaccggcgaagaaagcggcaggtaaagcagcaaagaaagccgtaagcgacgatgacgac
gacgttgaaatggacactgagccagccgtcgcgaaacgtaccgaagcacctagacgagct
gcaagggccgcgccaaagaaatacatagatatatcggacgatgacggtgacgacggagga
caggatgagacgtttgagatatccgactga

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