Fomitiporia mediterranea: FOMMEDRAFT_122296
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Entry
FOMMEDRAFT_122296 CDS
T03132
Name
(RefSeq) DNA topoisomerase II
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fme03032
]
FOMMEDRAFT_122296
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_122296
Enzymes [BR:
fme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FOMMEDRAFT_122296
DNA replication proteins [BR:
fme03032
]
Eukaryotic type
DNA Topoisomerases
FOMMEDRAFT_122296
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
FOMMEDRAFT_122296
Centrosome formation proteins
Centriole proteins
FOMMEDRAFT_122296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18671211
NCBI-ProteinID:
XP_007266092
JGI:
Fomme1_122296
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MDVDDRANGSGDESRPGPSTLDDPAFTRAPMDGKTASEHYKKLTPREHVIARPDSYIGSV
ETITQSMWVYDSDAKRMVFREVSYVPGFLKIVDEIIVNAADNKINDPNMDTIKVNINAKE
GTISVYNNGRGIPIEMHEKEKIMIPEMIFGHLLTSGNYDDTIKKLTGGRNGYGAKLANIY
STEFTLETADKNTAQKYKQTWTKNMSVCGKAKITKNSKGEEFTRVSFTPDFERFKMRGMD
ADALALLKKRVYDLAGTVKDIKVYLNDERLKIKNFKQYVEMYLSSAAAEAAGASGGAAQA
KPSVIYEQLGPRWEIAFAVSDGSFQQVSFANSIATTKGGTHVEYIANQITKHLISTIQRK
NKGATVKPAQIKNHMWIFVNALIENPSFDSQTKETLTKTAGGFGTKPTISEDFMKKVMKT
SLVENVLNWAKFKADQQIKKTDGAKRSRLLGITKLADANNAGTREASKCTLILTEGDSAK
ALAVAGLGVVGRNNFGVFPLRGKMLNVREAKHDQIMKNEEIQNVKKILGLQHNKEYKDIA
SLRYGRLMIMTDQDHDGSHIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGKQRID
FFTLPEFEKWQAETPDSHKWSSKYYKGLGTSKDSDARDYFSNMGKHMIPFATTQEGDREL
IELAFSKKKADERKEWLRQFRPGTYLDHNVDEIPYSDFINKELILFSMADNIRSIPSVAD
GLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEQSLTMTIVNLAQDFVGSNN
MNLLLPNGQYGTRDQGGKDHASARYIYTEPAPISRLVFHQSDDALLNEQKEDGQVIEPEF
YVPILPLVLVNGAEGIGTGWSTTVPSYNPVDIVDNLKRLMKGEELVPMNPWWRGFNGTIK
KTGDNKFEVTGVVKKLNDTTVEITELPIHKWTQAFKAELESMCGEKGDGAVKDYKEHHDN
RNVHFVVNMNAKELEKAEAQGLEEYFKLTSKISTSNMICFDFEGKIKKYNTPEEILEDFF
PVRLGLYQKRKDYLANELQLEHEKLSNQARFVQMIVKKELVVSGRKKVDIVADLRKKNFR
PFPKVAKAKAAGETEDALEDTEAEEQETGTTTDFDYLLGMPIYNLTHEKIEKLLEQARQK
ETELMTLLELTPSQIWNTDLDNFLALWEKTCKEWDESAIKDSSGKTVKRKQATLKTRKSL
TGPFGKRRKDDDDDSEDEFMPSKAAAKAVAKKPDPIERKVSRTKAIIKNESDDDDDLFVA
PGPSKPTARKAAETMRKVSRSKPVTKVVSDDSDDDDDKLTVTKASTKDESDYELPKPPSK
RKALAKADDLEDELALTTEKGKGKAKVAPKRKSLTADEGSDDDDLASSKPPKKKAQVSLR
AFLGKDDGESKAKPPTPSKVAGMKPKPKAAPAKKPVISDEDSDTEVIPAAKSKPKPQPKA
APAKKAAGKAAKKAVSDDDDDVEMDTEPAVAKRTEAPRRAARAAPKKYIDISDDDGDDGG
QDETFEISD
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacgatcgtgctaatgggtcaggggacgagagcaggccgggtccgtcgact
ctcgacgaccctgcttttactcgcgcaccaatggacggtaaaaccgcttcagagcactac
aagaagctcaccccaagagaacacgttattgcacggccagactcttacattgggagcgtc
gaaactataacgcagtccatgtgggtgtatgactcggatgcaaaaagaatggtattcagg
gaagtgagctatgttcccggattcttgaagattgtagacgagatcatcgtgaatgctgcc
gacaacaagatcaacgacccgaatatggatacgatcaaagttaacatcaatgcgaaagaa
ggtaccatctccgtttacaacaacgggaggggtattccaatagaaatgcacgaaaaggag
aaaattatgatacctgaaatgatatttggtcatcttctgacgtctggcaactatgacgat
accatcaagaaactcacgggaggcagaaatggctatggagcgaagctggcaaacatctac
tcgacggagttcaccctggagacggcggacaagaatactgcgcagaagtacaagcaaaca
tggacgaagaacatgtcggtctgtggaaaggcgaaaatcacgaagaatagcaagggcgaa
gaatttactcgtgtatcgttcacgccagactttgaaaggttcaaaatgcgaggaatggac
gccgatgccttggcacttctgaagaagcgcgtttacgatttggctggaaccgtcaaagac
attaaggtctacttgaatgacgaacgccttaagatcaagaatttcaagcagtatgtcgaa
atgtatctcagctctgctgccgcagaagccgccggtgcttcaggaggtgcagcacaagcc
aagccaagcgtcatttacgagcaacttggtccgaggtgggagattgcctttgcggtatcc
gatggctcgtttcagcaagtgtcattcgcgaactcgattgcgacaacaaaggggggaacg
catgtcgaatacatcgcgaatcagatcacaaagcacctcatctcgacaatccagaggaag
aacaagggtgcgacagtcaagccagcacaaatcaagaaccatatgtggattttcgtcaac
gcactcattgaaaatccctcttttgactcgcagacgaaggagactttgacgaaaacggcc
ggtgggtttggtacaaaaccaacgatatcagaagattttatgaagaaagttatgaaaact
agccttgtcgaaaacgttctgaattgggcgaagtttaaagctgaccagcaaattaagaag
actgacggagcaaagcgtagccgactccttggcataacgaagcttgctgacgcgaacaat
gctggaactcgtgaagcttcgaaatgtactcttatactgacagaaggagactctgccaag
gcacttgctgtggccggtctcggtgttgttggccgaaacaactttggtgttttccctttg
cgcggaaaaatgcttaacgtgcgcgaagcgaaacatgatcaaatcatgaagaacgaggag
atccagaatgtcaagaagattctcggtttgcagcacaataaggaatataaagatattgct
agtctgcgttatgggcgtctaatgatcatgacggatcaggatcacgatggttcccatatc
aaaggcttattgattaacttcctcgaccacttctacccatctttgctgaaggtacccgag
ttcctcgtggaattcgtcacaccaatcgttagggtgacaaagggcaaacaacgaatcgat
ttcttcactctacctgagtttgagaaatggcaagcagagacccctgactcgcataaatgg
agctctaagtactacaagggtctcggtacgagcaaagattcagatgctcgcgactacttc
agcaatatgggaaagcacatgatcccgtttgccacgacccaagaaggtgatcgagaatta
attgaactcgctttcagtaaaaagaaagcagacgagcgtaaggagtggctgagacagttc
aggcctggaacgtatcttgaccacaatgtggatgaaatcccatactctgatttcatcaac
aaggagctcattctgttctcaatggcggacaacatccgttctatcccatcggttgcggac
ggattaaaaccgggtcagaggaaggttatctggggttgcttcaagcgcaagttgaagaaa
gaaatcaaggttgcgcaattagtcggttacatctcagaacatgcggcataccatcacggc
gaacagagtttgaccatgactattgtcaatttagcacaagattttgtcgggagtaacaac
atgaatcttctcttgccgaatggtcagtacggtacgcgtgatcagggcggaaaagaccat
gcatcggctcgttacatctacacggagcctgcacctatttcacggctggtcttccatcaa
agtgatgatgcgcttctaaacgaacaaaaggaagatggacaagtcattgagcctgaattt
tacgtgcctatcctcccactcgttctcgtgaatggtgcagaaggtattggtacaggttgg
agcacgactgtaccgtcgtataatcctgtggacatcgttgataatctcaaacgattaatg
aaaggcgaggagttggttccaatgaatccatggtggcgtggcttcaatgggacaataaag
aagactggtgacaacaagtttgaggttaccggagtggtgaagaagctgaacgacacaacg
gttgaaatcaccgagctgccaattcacaagtggacgcaggcatttaaagccgaacttgag
agcatgtgtggcgaaaagggtgatggcgctgtcaaggattataaggaacaccacgacaac
cgtaacgtgcacttcgtcgtgaatatgaatgccaaggaacttgagaaagccgaggcgcaa
ggcttggaagaatacttcaagctcacgtccaagattagcacaagcaacatgatttgtttt
gacttcgagggaaagatcaagaagtacaatacacctgaagaaatccttgaggacttcttc
cccgtaaggctaggcctctatcaaaagcgaaaggactatctcgcgaatgagcttcagctc
gaacacgagaagctgtcaaatcaggcacgattcgtccaaatgattgtcaagaaggagctc
gttgtctcgggtcgtaagaaagtagacattgtcgccgaccttcgcaagaagaatttcagg
ccgttcccgaaggtagcaaaggcgaaggcggctggcgaaaccgaggatgcactagaggat
actgaagctgaggaacaagaaactggtacaacaacagatttcgattacttgctcggcatg
ccgatctacaatctaactcatgagaagattgagaaactcctagagcaggctagacagaag
gagactgagctcatgacgttgctcgaactcactccgagtcagatttggaacacagatctc
gacaatttccttgctctgtgggagaaaacatgcaaggaatgggatgaatccgcgattaaa
gattcctctggaaagaccgtcaagaggaagcaggcaacattgaagacgcgcaagtcccta
acaggtcccttcggaaagaggaggaaagatgatgacgatgactcggaagacgagtttatg
ccttcgaaggcagctgcaaaagctgttgcaaagaaacctgatcccattgagcgcaaggtc
tcccgtactaaggcaatcatcaagaatgaatcagatgatgacgacgacctatttgttgct
cctggtccctcgaagccaactgcgagaaaagcagcagagacaatgcgcaaagtctcccgg
tcgaagcctgtgacgaaggtcgtgtcggacgatagcgatgacgacgacgacaaactgact
gtcactaaggcatcgacaaaggacgaatctgattacgagctaccgaagccgccatcaaag
aggaaagccctcgcaaaggccgacgacttagaagacgaacttgcgctgacaaccgagaag
ggtaaaggaaaggcgaaagtcgcaccaaagcgaaagagtctcacggccgacgaaggtagc
gatgatgatgatcttgcttcttccaagccacctaagaagaaggcgcaagtctcgctccga
gcgttcctcggtaaagatgatggagagtcgaaagccaagcctcctaccccgagtaaggtt
gctgggatgaagccaaagccaaaggctgcacctgcgaaaaagcctgtaatcagcgacgag
gactctgacacggaggttatacctgctgccaaatcgaaaccgaagccacaaccgaaagct
gcaccggcgaagaaagcggcaggtaaagcagcaaagaaagccgtaagcgacgatgacgac
gacgttgaaatggacactgagccagccgtcgcgaaacgtaccgaagcacctagacgagct
gcaagggccgcgccaaagaaatacatagatatatcggacgatgacggtgacgacggagga
caggatgagacgtttgagatatccgactga
DBGET
integrated database retrieval system