Fenollaria massiliensis: M1R53_04885
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Entry
M1R53_04885 CDS
T08130
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fms
Fenollaria massiliensis
Brite
KEGG Orthology (KO) [BR:
fms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fms03009
]
M1R53_04885 (rimO)
Enzymes [BR:
fms01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M1R53_04885 (rimO)
Ribosome biogenesis [BR:
fms03009
]
Prokaryotic type
ribosomal protein modification factors
M1R53_04885 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
TraT
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UQK58577
UniProt:
A0A9E7DIR0
LinkDB
All DBs
Position
complement(963944..965263)
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AA seq
439 aa
AA seq
DB search
MNKVFILTMGCSKNDVDSETMAYKLKNNDYTIINNPSDADYIIINTCSFINAAKEESIDA
IFDMINQKKDGAKIIVSGCLAQRYSKELKEEIPEIDIIVGTGNFQNISEIIKEYEENNKD
DVYIDNINADIEYIEKDVADVTEYVKIAEGCNNNCSYCIIPKLRGRLRSRPIDDIVNEIN
HLHKLGTKEVILIAQNTTDYGMDIYSRPSLDMLLKAILERTKMPWIRIMYLYPDNITDDL
IETFNSSERILKYMDIPLQHASDHVLKMMNRHIDKDEIHELITKLRTKIADLVLRTTFIV
GFPGEREEDFEELLNFIKKEKFDKLGVFEYSDEEGTRSYSFNEKLDEKTKAERREKIMDA
QMDISRASLEKRVGTVMKCLVEDGDAGEYTLRSFMDAPDVDGQVYVTSDKDLEIGSFVDV
KIIEALEYDLRGEIYEPSK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagtatttatacttactatgggctgctcaaaaaatgatgtagactcagagact
atggcatataaactaaagaataatgactatactataataaataatccatctgatgctgat
tatatcatcataaacacttgttcatttataaatgcagcgaaagaagagtccatagacgct
atatttgatatgattaatcaaaagaaggatggagctaagattattgttagcggatgcctt
gctcaaagatactcaaaagagctaaaagaagagattcctgagatagacatcatagttggt
acaggtaattttcaaaatatttctgaaataattaaagaatacgaagaaaataataaagat
gatgtttatatagataacatcaacgcagatattgaatatatagaaaaagatgttgcagac
gtgacagaatacgtaaaaattgctgagggctgtaacaataactgctcttactgcataata
ccaaagcttagaggcagacttagatcaaggcccattgatgatatagttaatgagatcaat
catctacataagcttggtactaaagaagttattcttatcgcacaaaacacaacagattat
ggcatggacatatattcaaggccatctttagatatgcttttaaaagcaatacttgagagg
accaagatgccttggataagaattatgtatctatatccagataatatcacagatgattta
atcgaaacatttaattcatcagaaagaatacttaagtatatggacataccacttcaacat
gcttcagaccacgttcttaagatgatgaatagacatattgataaagacgaaattcatgaa
ttaatcacaaaattaagaactaagatagctgatctagttttaagaactacattcatagtc
ggctttccaggtgagcgagaagaagattttgaagagttacttaattttattaaaaaagaa
aaatttgataagcttggcgtttttgaatatagcgacgaagagggtacaaggagctactct
ttcaatgaaaaacttgatgaaaagacaaaagctgaaagaagagaaaaaattatggacgcg
caaatggatatctcaagagcgagccttgaaaaaagagttggaaccgtgatgaaatgttta
gttgaagatggggacgctggcgaatacactctaagaagctttatggatgcacctgatgta
gatggacaagtttatgtaacgagcgataaagacctagagataggaagctttgtagatgta
aaaattattgaagcgcttgaatatgatttaagaggtgaaatttatgaacctagcaaataa
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